About Textpresso Categories/Ontology Copyright Downloads Feedback Home Query Language Search User Guide
Enter keyword(s) and/or category/ies. Selecting categories for a query makes a search more specific. For example, you can retrieve sentences that contain the word HSN and a Oryza sativa gene name by typing the keyword 'SPW1' and choosing the category 'gene (Oryza sativa)'. A category hit occurs when a particular word or phrase in the sentence is defined as a member of a particular category. Categories will be concatenated by a Boolean 'and' operation to other categories and keyword(s) if present. To search for terms in categories, click on the Categories/Ontology link above.
Keywords
Separate multiple, required keywords by white spaces (Boolean 'and').
Separate multiple, alternative keywords by a comma with no white spaces (Boolean 'or').
Enter phrases in double quotes, and put a '-' sign in front of words which are to be excluded.
Keyword Specification
AND/OR
Categories
Fields
Search Scope
Search Mode
Sort by
 
Narrow your search results with filter:
Put a '+' sign in front of words which have to be included, a '-' sign in front of words which have to be excluded. Enter the field of the word, viz author, title, year, journal, abstract, type or sentence in square brackets. Enter phrases in double quotes.
For example, to find all the papers in the search result that have Jack as author, but not John, enter +Jack-John[author]. To exclude all papers that have the phrase double mutant in title, enter -"double mutant"[title]. You can combine several filters and enter something like +Jack-John[author] -"double mutant"[title] +1994[year] -review[type].
Click on Filter! button to activate the filter.

Goto:
of 1
Display options:
author: on | off accession: on | off type: on | off abstract: on | off title: on | off
citation: on | off journal: on | off year: on | off supplementals: on | off textlinks: on | off
searchterm-highlighting: on | off matching sentences: none 1 5 10 entries/page: 5 10 20 50
8 matches found in 3 documents. Search time: 0.16 seconds.
Global links/files: all results in endnote all results in print version
Score: 6.00
Title: Purification and comparative neurotoxicity of the trichothecenes satratoxin g and roridin l2 from stachybotrys chartarum .
Author: Islam Z Shinozuka J Harkema JR Pestka JJ
Journal: J Toxicol Environ Health A Citation: V : 72 P : 1242-51 Year: 2009 Type: In-Process
Literature: oryza Field: abstract Doc ID: pub20077192 Accession (PMID): 20077192
Abstract: Satratoxin G ( SG ) , a macrocyclic trichothecene produced by Stachybotrys chartarum , induces apoptosis in cultured neuronal cells as well as nasal olfactory sensory neurons ( OSN ) in the nose and brain of mice exposed intranasally to this toxin . The purposes of this study were to ( 1 ) develop a facile method for production and purification of both SG and its putative biosynthetic precursor , roridin L2 ( RL2 ) , from S chartarum cultures and ( 2 ) compare their relative neurotoxicity in vitro and in vivo . Stachybotrys chartarum 29-58-17 was cultured in Fernbach flasks on rice ( 5 x 10 ( 5 ) spores/250 g rice ) for 4 to 6 wk . Following extraction with acetonitrile , the extract was dried , dissolved in dichloromethane , and subjected to Michel-Miller silica-gel chromatography using a stepwise acetonitrile-dichloromethane gradient with SG and RL2 eluting in the 30 and 40% acetonitrile fractions , respectively . Purification of the two compounds was completed by C18 semipreparative reverse-phase liquid chromatography using an acetonitrile-water gradient , and purity was confirmed by electrospray ionization/collision-induced dissociation ( ESI-CID ) tandem mass spectroscopy . Although viability significantly decreased in PC-12 neuronal cells treated with 10 to 25 ng/ml of SG , RL2 at concentrations up to 1000 ng/ml was not toxic . Flow cytometry and agarose DNA fragmentation assays revealed that SG at 10 to 25 ng/ml induced apoptotic death in the PC-12 cells , while RL2 at concentrations up to 1000 ng/ml was without effect . In a similar fashion , intranasal exposure of mice ( female B6C3F1 ) to SG at 100 microg/kg body weight ( bw ) induced marked OSN apoptosis and atrophy of the olfactory epithelium , whereas RL2 at the equivalent dose did not exhibit toxicity . Taken together , an optimized protocol for production and isolation of trichothecenes from S chartarum cultures is described and further demonstrates that while the macrocyclic SG was neurotoxic in vitro and in vivo , its biosynthetic precursor , RL2 , was nontoxic .
Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: The purposes of this study were to ( 1 ) develop a facile method for production and purification of both SG and its putative biosynthetic precursor , roridin L2 ( RL2 ) , from S chartarum cultures and ( 2 ) compare their relative neurotoxicity in vitro and in vivo .
[ Sen. 4, subscore: 1.00 ]: Following extraction with acetonitrile , the extract was dried , dissolved in dichloromethane , and subjected to Michel-Miller silica-gel chromatography using a stepwise acetonitrile-dichloromethane gradient with SG and RL2 eluting in the 30 and 40% acetonitrile fractions , respectively .
[ Sen. 6, subscore: 1.00 ]: Although viability significantly decreased in PC-12 neuronal cells treated with 10 to 25 ng/ml of SG , RL2 at concentrations up to 1000 ng/ml was not toxic .
[ Sen. 7, subscore: 1.00 ]: Flow cytometry and agarose DNA fragmentation assays revealed that SG at 10 to 25 ng/ml induced apoptotic death in the PC-12 cells , while RL2 at concentrations up to 1000 ng/ml was without effect .
[ Sen. 8, subscore: 1.00 ]: In a similar fashion , intranasal exposure of mice ( female B6C3F1 ) to SG at 100 microg/kg body weight ( bw ) induced marked OSN apoptosis and atrophy of the olfactory epithelium , whereas RL2 at the equivalent dose did not exhibit toxicity .
[ Sen. 9, subscore: 1.00 ]: Taken together , an optimized protocol for production and isolation of trichothecenes from S chartarum cultures is described and further demonstrates that while the macrocyclic SG was neurotoxic in vitro and in vivo , its biosynthetic precursor , RL2 , was nontoxic .
Supplemental links/files: reference in endnote online text related articles pubmed citation
Score: 1.00
Title: Stimulatory effects of biosurfactant produced by Pseudomonas aeruginosa BSZ-07 on rice straw decomposing .
Author: Zhang Q Cai W Wang J
Journal: J Environ Sci ( China ) Citation: V : 20 P : 975-80 Year: 2008 Type: MEDLINE
Literature: oryza Field: abstract Doc ID: pub18817078 Accession (PMID): 18817078
Abstract: Biosurfactant , produced by Pseudomonas aeruginosa BSZ-07 , was added to the rice straw decomposing process to enhance the production of reducing sugars . Observed by Fourier Transform InfraRed ( FT-IR ) and Nuclear Magnetic Resonance ( NMR ) analysis , the purified biosurfactant was considered as a mixture of RL1 and RL2 , which are two different types of rhamnolipids . Two different adding methods , adding the purified rhamnolipid and the on-site production of it were compared . The results showed that 0 . 5 g/L was the optimum concentration for adding purified rhamnolipid and the optimum temperature for on-site production was 30 degrees C for the first 48 h and 34 degrees C for the next 48 h . Under the optimum conditions , these two adding methods could improve the production of reducing sugar to 2 . 730 and 2 . 504 g/L , which was 22 . 30% and 12 . 20% higher than that of the rhamnolipid-free sample , respectively , which indicated that both of them were more effective than any other kind of surfactant discussed in this article . As the on-site production of rhamnolipid could omit the purification process , thus reducing the production cost effectively , it seemed to be a prospective adding method of the biosurfactant for enhancing rice straw decomposing .
Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: Observed by Fourier Transform InfraRed ( FT-IR ) and Nuclear Magnetic Resonance ( NMR ) analysis , the purified biosurfactant was considered as a mixture of RL1 and RL2 , which are two different types of rhamnolipids .
Supplemental links/files: reference in endnote online text related articles pubmed citation
Score: 1.00
Title: Isolation and characterization of a rice mutant with narrow and rolled leaves .
Author: Wu C Fu Y Hu G Si H Cheng S Liu W
Journal: Planta Citation: V : 232 P : 313-24 Year: 2010 Type: MEDLINE
Literature: oryza Field: abstract Doc ID: pub20443024 Accession (PMID): 20443024
Abstract: Appropriate leaf shape has proved to be useful in improving photosynthesis and increasing grain yield . To understand the molecular mechanism of leaf morphogenesis , we identified a rice mutant nrl1 , which was characterized by a phenotype of narrow and rolled leaves . Microscopic observation showed that the mutation significantly decreased the number of vascular bundles of leaf and stem . Genetic analysis revealed that the mutation was controlled by a single nuclear-encoded recessive gene . To isolate the nrl1 gene , 756 F ( 2 ) and F ( 3 ) mutant individuals from a cross of the nrl1 mutant with Longtepu were used and a high-resolution physical map of the chromosomal region around the nrl1 gene was made . Finally , the gene was mapped in 16 . 5 kb region between marker RL21 and marker RL36 within the BAC clone OSJNBa0027H05 . Cloning and sequencing of the target region from the mutant showed that there was a 58 bp deletion within the second exon of the cellulose synthase-like D4 gene ( TIGR locus Os12g36890 ) . The nrl1 mutation was rescued by transformation with the wild-type cellulose synthase-like D4 gene . Accordingly , the cellulose synthase-like D4 gene was identified as the NRL1 gene . NRL1 was transcribed in various it issues and was mainly expressed in panicles and internodes . NAL7 and SLL1 were found to be upregulated , whereas OsAGO7 were downregulated in the nrl1 mutant . These findings suggested that there might be a functional association between these genes in regulating leaf development .
Matching Sentences:
[ Sen. 6, subscore: 1.00 ]: Finally , the gene was mapped in 16 . 5 kb region between marker RL21 and marker RL36 within the BAC clone OSJNBa0027H05 .
Supplemental links/files: reference in endnote online text related articles pubmed citation
Goto:

© Textpresso Mon May 13 13:03:30 2024 .