About Textpresso Categories/Ontology Copyright Downloads Feedback Home Query Language Search User Guide
Enter keyword(s) and/or category/ies. Selecting categories for a query makes a search more specific. For example, you can retrieve sentences that contain the word HSN and a Oryza sativa gene name by typing the keyword 'SPW1' and choosing the category 'gene (Oryza sativa)'. A category hit occurs when a particular word or phrase in the sentence is defined as a member of a particular category. Categories will be concatenated by a Boolean 'and' operation to other categories and keyword(s) if present. To search for terms in categories, click on the Categories/Ontology link above.
Keywords
Separate multiple, required keywords by white spaces (Boolean 'and').
Separate multiple, alternative keywords by a comma with no white spaces (Boolean 'or').
Enter phrases in double quotes, and put a '-' sign in front of words which are to be excluded.
Keyword Specification
AND/OR
Categories
Fields
Search Scope
Search Mode
Sort by
 
Narrow your search results with filter:
Put a '+' sign in front of words which have to be included, a '-' sign in front of words which have to be excluded. Enter the field of the word, viz author, title, year, journal, abstract, type or sentence in square brackets. Enter phrases in double quotes.
For example, to find all the papers in the search result that have Jack as author, but not John, enter +Jack-John[author]. To exclude all papers that have the phrase double mutant in title, enter -"double mutant"[title]. You can combine several filters and enter something like +Jack-John[author] -"double mutant"[title] +1994[year] -review[type].
Click on Filter! button to activate the filter.
Goto:
of 1
Display options:
author: on | off accession: on | off type: on | off abstract: on | off title: on | off
citation: on | off journal: on | off year: on | off supplementals: on | off textlinks: on | off
searchterm-highlighting: on | off matching sentences: none 1 5 10 entries/page: 5 10 20 50
2 matches found in 1 documents. Search time: 0.087 seconds.
Global links/files: all results in endnote all results in print version
Score: 3.00
Title: Novel miRNAs in the control of arsenite levels in rice .
Author: Liu Q
Journal: Funct Integr Genomics Citation: V : P : Year: 2012 Type: Publisher
Literature: oryza Field: abstract Doc ID: pub22585409 Accession (PMID): 22585409
Abstract: In a species , the miRNA repertoire comprises many lineage or species-specific miRNAs . Using deep sequencing , the whole transcriptome of seedling roots was studied and a total of 18 novel miRNAs in indica rice Minghui 86 were identified . Among these novel miRNAs six were up-regulated and two were down-regulated under arsenite stress . Quantitative real-time RT-PCR analysis revealed that miR6254 was predominantly expressed in roots relative to other it issues , whereas miR6250 and miR169i-3p were constitutively expressed in all it issues examined , with high abundance in roots ( miR6250 ) or leaves ( miR169i-3p ) . The miR6250 and miR169i-3p miRNAs also exhibited distinct expression patterns in rice cultivars Minghui 86 and Nipponbare at different time points after arsenite treatment . The predicted targets for these miRNAs included some protein kinases , DNA , or ATP-binding proteins . Besides arsenite , the expression of targets of miR6250 and miR6254 was also up or down-regulated in response to abiotic environmental stresses , indicative of their involvement in regulation of plant adaptation . Three types of cis-elements involved in hormone , light , and stress response were found to occur frequently in the promoter regions . Interestingly , miR6254 was originally characterized to be an exonic miRNA located in the exon of AK101391 , supporting the notion that miRNAs may also originate from some exons in plants .
Matching Sentences:
[ Sen. 4, subscore: 2.00 ]: Quantitative real-time RT-PCR analysis revealed that miR6254 was predominantly expressed in roots relative to other it issues , whereas miR6250 and miR169i-3p were constitutively expressed in all it issues examined , with high abundance in roots ( miR6250 ) or leaves ( miR169i-3p ) .
[ Sen. 5, subscore: 1.00 ]: The miR6250 and miR169i-3p miRNAs also exhibited distinct expression patterns in rice cultivars Minghui 86 and Nipponbare at different time points after arsenite treatment .
Supplemental links/files: reference in endnote online text related articles pubmed citation
Goto:

© Textpresso Sat May 11 14:13:36 2024 .