About Textpresso Categories/Ontology Copyright Downloads Feedback Home Query Language Search User Guide
Enter keyword(s) and/or category/ies. Selecting categories for a query makes a search more specific. For example, you can retrieve sentences that contain the word HSN and a Oryza sativa gene name by typing the keyword 'SPW1' and choosing the category 'gene (Oryza sativa)'. A category hit occurs when a particular word or phrase in the sentence is defined as a member of a particular category. Categories will be concatenated by a Boolean 'and' operation to other categories and keyword(s) if present. To search for terms in categories, click on the Categories/Ontology link above.
Keywords
Separate multiple, required keywords by white spaces (Boolean 'and').
Separate multiple, alternative keywords by a comma with no white spaces (Boolean 'or').
Enter phrases in double quotes, and put a '-' sign in front of words which are to be excluded.
Keyword Specification
AND/OR
Categories
Fields
Search Scope
Search Mode
Sort by
 
Narrow your search results with filter:
Put a '+' sign in front of words which have to be included, a '-' sign in front of words which have to be excluded. Enter the field of the word, viz author, title, year, journal, abstract, type or sentence in square brackets. Enter phrases in double quotes.
For example, to find all the papers in the search result that have Jack as author, but not John, enter +Jack-John[author]. To exclude all papers that have the phrase double mutant in title, enter -"double mutant"[title]. You can combine several filters and enter something like +Jack-John[author] -"double mutant"[title] +1994[year] -review[type].
Click on Filter! button to activate the filter.

Goto:
of 3
Display options:
author: on | off accession: on | off type: on | off abstract: on | off title: on | off
citation: on | off journal: on | off year: on | off supplementals: on | off textlinks: on | off
searchterm-highlighting: on | off matching sentences: none 1 5 10 entries/page: 5 10 20 50
21 matches found in 10 documents. Search time: 0.445 seconds.
Global links/files: all results in endnote all results in print version
Score: 5.00
Title: Expression of BrD1 , a plant defensin from Brassica rapa , confers resistance against brown planthopper ( Nilaparvata lugens ) in transgenic rices .
Author: Choi MS Kim YH Park HM Seo BY Jung JK Kim ST Kim MC Shin DB Yun HT Choi IS Kim CK Lee JY
Journal: Mol Cells Citation: V : 28 P : 131-7 Year: 2009 Type: In-Process
Literature: oryza Field: abstract Doc ID: pub19714315 Accession (PMID): 19714315
Abstract: Plant defensins are small ( 5-10 kDa ) basic peptides thought to be an important component of the defense pathway against fungal and/or bacterial pathogens . To understand the role of plant defensins in protecting plants against the brown planthopper , a type of insect herbivore , we isolated the Brassica rapa Defensin 1 ( BrD1 ) gene and introduced it into rice ( Oryza sativa L ) to produce stable transgenic plants . The BrD1 protein is homologous to other plant defensins and contains both an N-terminal endoplasmic reticulum signal sequence and a defensin domain , which are highly conserved in all plant defensins . Based on a phylogenetic analysis of the defensin domain of various plant defensins , we established that BrD1 belongs to a distinct subgroup of plant defensins . Relative to the wild type , transgenic rices expressing BrD1 exhibit strong resistance to brown planthopper nymphs and female adults . These results suggest that BrD1 exhibits insecticidal activity , and might be useful for developing cereal crop plants resistant to sap-sucking insects , such as the brown planthopper .
Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: To understand the role of plant defensins in protecting plants against the brown planthopper , a type of insect herbivore , we isolated the Brassica rapa Defensin 1 ( BrD1 ) gene and introduced it into rice ( Oryza sativa L ) to produce stable transgenic plants .
[ Sen. 3, subscore: 1.00 ]: The BrD1 protein is homologous to other plant defensins and contains both an N-terminal endoplasmic reticulum signal sequence and a defensin domain , which are highly conserved in all plant defensins .
[ Sen. 4, subscore: 1.00 ]: Based on a phylogenetic analysis of the defensin domain of various plant defensins , we established that BrD1 belongs to a distinct subgroup of plant defensins .
[ Sen. 5, subscore: 1.00 ]: Relative to the wild type , transgenic rices expressing BrD1 exhibit strong resistance to brown planthopper nymphs and female adults .
[ Sen. 6, subscore: 1.00 ]: These results suggest that BrD1 exhibits insecticidal activity , and might be useful for developing cereal crop plants resistant to sap-sucking insects , such as the brown planthopper .
Supplemental links/files: reference in endnote online text related articles pubmed citation
Score: 4.00
Title: Isolation and characterization of a rice dwarf mutant with a defect in brassinosteroid biosynthesis .
Author: Mori M Nomura T Ooka H Ishizaka M Yokota T Sugimoto K Okabe K Kajiwara H Satoh K Yamamoto K Hirochika H Kikuchi S
Journal: Plant Physiol . Citation: V : 130 ( 3 ) P : 1152-61 Year: 2002 Type: ARTICLE
Literature: oryza Field: abstract Doc ID: pub12427982 Accession (PMID): 12427982
Abstract: We have isolated a new recessive dwarf mutant of rice ( Oryza sativa L cv Nipponbare ) . Under normal growth conditions , the mutant has very short leaf sheaths ; has short , curled , and frizzled leaf blades ; has few tillers ; and is sterile . Longitudinal sections of the leaf sheaths revealed that the cell length along the longitudinal axis is reduced , which explains the short leaf sheaths . Transverse sections of the leaf blades revealed enlargement of the motor cells along the dorsal-ventral axis , which explains the curled and frizzled leaf blades . In addition , the number of crown roots was smaller and the growth of branch roots was weaker than those in the wild-type plant . Because exogenously supplied brassinolide considerably restored the normal phenotypes , we designated the mutant brassinosteroid-dependent 1 ( brd1 ) . Further , under darkness , brd1 showed constitutive photomorphogenesis . Quantitative analyses of endogenous sterols and brassinosteroids ( BRs ) indicated that BR-6-oxidase , a BR biosynthesis enzyme , would be defective . In fact , a 0 . 2-kb deletion was detected in the genomic region of OsBR6ox ( a rice BR-6-oxidase gene ) in the brd1 mutant . These results indicate that BRs are involved in many morphological and physiological processes in rice , including the elongation and unrolling of leaves , development of tillers , skotomorphogenesis , root differentiation , and reproductive growth , and that the defect of BR-6-oxidase caused the brd1 phenotype .
Matching Sentences:
[ Sen. 6, subscore: 1.00 ]: Because exogenously supplied brassinolide considerably restored the normal phenotypes , we designated the mutant brassinosteroid-dependent 1 ( brd1 ) .
[ Sen. 7, subscore: 1.00 ]: Further , under darkness , brd1 showed constitutive photomorphogenesis .
[ Sen. 9, subscore: 1.00 ]: In fact , a 0 . 2-kb deletion was detected in the genomic region of OsBR6ox ( a rice BR-6-oxidase gene ) in the brd1 mutant .
[ Sen. 10, subscore: 1.00 ]: These results indicate that BRs are involved in many morphological and physiological processes in rice , including the elongation and unrolling of leaves , development of tillers , skotomorphogenesis , root differentiation , and reproductive growth , and that the defect of BR-6-oxidase caused the brd1 phenotype .
Supplemental links/files: reference in endnote online text related articles pubmed citation
Score: 4.00
Title: Loss-of-function of a rice brassinosteroid biosynthetic enzyme , C-6 oxidase , prevents the organized arrangement and polar elongation of cells in the leaves and stem .
Author: Hong Z Ueguchi-Tanaka M Shimizu-Sato S Inukai Y Fujioka S Shimada Y Takatsuto S Agetsuma M Yoshida S Watanabe Y Uozu S Kitano H Ashikari M Matsuoka M
Journal: Plant J Citation: V : 32 ( 4 ) P : 495-508 Year: 2002 Type: ARTICLE
Literature: oryza Field: abstract Doc ID: pub12445121 Accession (PMID): 12445121
Abstract: Molecular genetic and physiological studies on brassinosteroid ( BR ) -related mutants of dicot plants have revealed that BRs play important roles in normal plant growth and development . However , little is known about the function of BR in monocots ( grasses ) , except for the phenotypic analysis of a rice mutant partially insensitive to BR signaling . To investigate the function of BR in monocots , we identified and characterized BR-deficient mutants of rice , BR-deficient dwarf1 ( brd1 ) . The brd1 mutants showed a range of abnormalities in organ development and growth , the most striking of which were defects in the elongation of the stem and leaves . Light microscopic observations revealed that this abnormality was primarily owing to a failure in the organization and polar elongation of the leaf and stem cells . The accumulation profile of BR compounds in the brd1 mutants suggested that these plants may be deficient in the activity of BR C-6 oxidase . Therefore , we cloned a rice gene , OsDWARF , which has a high sequence similarity to the tomato C-6 oxidase gene , DWARF . Introduction of the wild-type OsDWARF gene into brd1 rescued the abnormal phenotype of the mutants . The OsDWARF gene was expressed at a low level in all of the examined it issues , with preferential expression in the leaf sheath , and the expression was negatively regulated by brassinolide treatment . On the basis of these findings , we discuss the biological function of BRs in rice plants .
Matching Sentences:
[ Sen. 3, subscore: 1.00 ]: To investigate the function of BR in monocots , we identified and characterized BR-deficient mutants of rice , BR-deficient dwarf1 ( brd1 ) .
[ Sen. 4, subscore: 1.00 ]: The brd1 mutants showed a range of abnormalities in organ development and growth , the most striking of which were defects in the elongation of the stem and leaves .
[ Sen. 6, subscore: 1.00 ]: The accumulation profile of BR compounds in the brd1 mutants suggested that these plants may be deficient in the activity of BR C-6 oxidase .
[ Sen. 8, subscore: 1.00 ]: Introduction of the wild-type OsDWARF gene into brd1 rescued the abnormal phenotype of the mutants .
Supplemental links/files: reference in endnote online text related articles pubmed citation
Score: 2.00
Title: The Rice brassinosteroid-deficient dwarf2 mutant , defective in the rice homolog of Arabidopsis DIMINUTO/DWARF1 , is rescued by the endogenously accumulated alternative bioactive brassinosteroid , dolichosterone .
Author: Hong Z Ueguchi-Tanaka M Fujioka S Takatsuto S Yoshida S Hasegawa Y Ashikari M Kitano H Matsuoka M
Journal: Plant Cell Citation: V : 17 ( 8 ) P : 2243-54 Year: 2005 Type: ARTICLE
Literature: oryza Field: abstract Doc ID: pub15994910 Accession (PMID): 15994910
Abstract: We have identified a rice ( Oryza sativa ) brassinosteroid ( BR ) -deficient mutant , BR-deficient dwarf2 ( brd2 ) . The brd2 locus contains a single base deletion in the coding region of Dim/dwf1 , a homolog of Arabidopsis thaliana DIMINUTO/DWARF1 ( DIM/DWF1 ) . Introduction of the wild-type Dim/dwf1 gene into brd2 restored the normal phenotype . Overproduction and repression of Dim/dwf1 resulted in contrasting phenotypes , with repressors mimicking the brd2 phenotype and overproducers having large stature with increased numbers of flowers and seeds . Although brd2 contains low levels of common 6-oxo-type BRs , the severity of the brd2 phenotype is much milder than brd1 mutants and most similar to d2 and d11 , which show a semidwarf phenotype at the young seedling stage . Quantitative analysis suggested that in brd2 , the 24-methylene BR biosynthesis pathway is activated and the uncommon BR , dolichosterone ( DS ) , is produced . DS enhances the rice lamina joint bending angle , rescues the brd1 dwarf phenotype , and inhibits root elongation , indicating that DS is a bioactive BR in rice . Based on these observations , we discuss an alternative BR biosynthetic pathway that produces DS when Dim/dwf1 is defective .
Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: Although brd2 contains low levels of common 6-oxo-type BRs , the severity of the brd2 phenotype is much milder than brd1 mutants and most similar to d2 and d11 , which show a semidwarf phenotype at the young seedling stage .
[ Sen. 7, subscore: 1.00 ]: DS enhances the rice lamina joint bending angle , rescues the brd1 dwarf phenotype , and inhibits root elongation , indicating that DS is a bioactive BR in rice .
Supplemental links/files: reference in endnote online text related articles pubmed citation
Score: 1.00
Title: OsBLE3 , a brassinolide-enhanced gene , is involved in the growth of rice .
Author: Yang G Nakamura H Ichikawa H Kitano H Komatsu S
Journal: Phytochemistry Citation: V : 67 ( 14 ) P : 1442-54 Year: 2006 Type: ARTICLE
Literature: oryza Field: abstract Doc ID: pub16808934 Accession (PMID): 16808934
Abstract: Brassinosteroids ( BRs ) are a group of plant hormones involved in a wide range of plant growth and developmental processes . To investigate the mechanism of BR action in monocots , a brassinolide ( BL ) upregulated gene designated OsBLE3 was identified , cloned and characterized in rice . It was mainly expressed in roots and leaf sheaths with levels of expression directly dependent on the dose of BL . In situ hybridization detected OsBLE3 mRNA in the shoot apical meristem , organ primordia and vascular it issue . Furthermore , its expression was enhanced by co-treatment with BL and low concentrations of IAA . These results , and the existence of auxin response elements in the 5-flanking region of the OsBLE3 gene , indicate that OsBLE3 expression is under control of both BR and auxin . The GUS reporter gene driven by a 2277 bp OsBLE3 putative promoter was mainly expressed in vascular it issues , branch root primordia and was responsive to exogenous BL treatment . OsBLE3 transcript levels were greatly reduced in brd1 plants , a BL deficient mutant , compared to the wild type control . In OsBRI1 antisense transgenic rice and OsBLE3 , the BR-insensitive mutant expression of OsBLE3 in response to exogenous BL treatment was significantly lower compared to that in control plants transformed with a vacant vector . Reduced OsBLE3 expression and growth retardation was also observed in OsBLE3 antisense transgenic rice plants . Internode cell length of the OsBLE3 antisense transgenic lines was about 70% of that in the vacant vector transformed control lines . These results suggest that OsBLE3 is involved in cell elongation in rice through dual regulation by BL and IAA .
Matching Sentences:
[ Sen. 8, subscore: 1.00 ]: OsBLE3 transcript levels were greatly reduced in brd1 plants , a BL deficient mutant , compared to the wild type control .
Supplemental links/files: reference in endnote online text related articles pubmed citation
Goto:

© Textpresso Sun May 12 03:45:10 2024 .