| 423 matches found in 290 documents. Search time: 0.008 seconds. |
|---|
|
Score: 1.00 |
|---|
| Title: A "defeated" rice resistance gene acts as a QTL against a virulent strain of Xanthomonas oryzae pv . oryzae .
| | Author: Li ZK Luo LJ Mei HW Paterson AH Zhao XH Zhong DB Wang YP Yu XQ Zhu L Tabien R Stansel JW Ying CS .
| | Journal: Mol . Gen . Genet . Citation: V : 261 ( 1 ) P : 58-63 Year: 1999 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10071210 Accession (PMID): 10071210 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: The genetic components responsible for qualitative and quantitative resistance of rice plants to three strains ( CR4 , CXO8 , and CR6 ) of Xanthomonas oryzae pv . oryzae ( Xoo ) were investigated using a set of 315 recombinant inbred lines ( RILs ) from the cross Lemont ( japonica ) x Teqing ( indica ) and a complete linkage map with 182 well distributed RFLP markers .
| |
Score: 1.00 |
|---|
| Title: Application of restriction fragment fingerprinting with a rice microsatellite sequence to assembling rice YAC clones .
| | Author: Ashikawa I Kurata N Saji S Umehara Y Sasaki T | | Journal: Genome Citation: V : 42 ( 2 ) P : 330-7 Year: 1999 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10231964 Accession (PMID): 10231964 | Matching Sentences:
[ Sen. 6, subscore: 1.00 ]: We applied this method to rearranging YACs that had previously been assigned to rice chromosome 6 by anchoring with RFLP markers .
| |
Score: 2.00 |
|---|
| Title: Identification of mutable slender glume gene in rice ( Oryza sativa L ) .
| | Author: Teraishi M Okumoto Y Hirochika H Horibata A Yamagata H Tanisaka T | | Journal: Mol . Gen . Genet . Citation: V : 261 ( 3 ) P : 487-94 Year: 1999 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10323229 Accession (PMID): 10323229 | Matching Sentences:
[ Sen. 6, subscore: 2.00 ]: In a subsequent RFLP analysis , slg was found to be located between the two RFLP loci XNpb20 and XNpb33 , with recombination values of 3 . 0 and 3 . 2% , respectively .
| |
Score: 2.00 |
|---|
| Title: RAPD mapping in a doubled haploid population of rice ( Oryza sativa L ) .
| | Author: Subudhi PK Huang N | | Journal: Hereditas Citation: V : 130 ( 1 ) P : 41-9 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10364828 Accession (PMID): 10364828 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: The RAPD technique provided improved marker coverage on a previously developed RFLP map .
[ Sen. 6, subscore: 1.00 ]: The RAPD analysis as a realistic and practical alternative to RFLP and their usefulness in anchoring the identified BAC contigs directly to chromosomes is discussed .
| |
Score: 2.00 |
|---|
| Title: Isolation and characterization of rice MADS box gene homologues and their RFLP mapping .
| | Author: Shinozuka Y Kojima S Shomura A Ichimura H Yano M Yamamoto K Sasaki T | | Journal: DNA Res .
Citation: V : 6 ( 2 ) P : 123-9 Year: 1999 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10382970 Accession (PMID): 10382970 | Matching Sentences:
[ Sen. 9, subscore: 1.00 ]: Restriction fragment length polymorphism ( RFLP ) linkage mapping revealed that the rice MADS box gene homologues reported here are not clustered but are located throughout the genome .
[ Sen. 10, subscore: 1.00 ]: The locus of E31864 on the RFLP map was closely linked to the long sterile lemma gene , g-1 .
| |
Score: 1.00 |
|---|
| Title: Physical map and organization of chromosome 7 in the rice blast fungus , Magnaporthe grisea .
| | Author: Zhu H Blackmon BP Sasinowski M Dean RA .
| | Journal: Genome Res .
Citation: V : 9 ( 8 ) P : 739-50 Year: 1999 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10447509 Accession (PMID): 10447509 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: Using 147 chromosome 7-specific single-copy BAC clones and 20 RFLP markers on chromosome 7 , 625 BAC clones were identified by hybridization .
| |
Score: 1.00 |
|---|
| Title: Characterization of Astragalus sinicus rhizobia by restriction fragment length polymorphism analysis of chromosomal and nodulation genes regions .
| | Author: Guo XW Zhang XX Zhang ZM Li FD .
| | Journal: Curr . Microbiol . Citation: V : 39 ( 6 ) P : 358-0364 Year: 1999 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10525842 Accession (PMID): 10525842 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: Genotypic diversity was determined by Southern hybridization using nodDBC genes as a probe , restriction fragment length polymorphism ( RFLP ) analysis of PCR-amplified 16S-23S rDNA intergenic spacers ( IGS ) , and plasmid profile .
| |
Score: 5.00 |
|---|
| Title: Phylogenetic relationships in the genus Oryza based on mitochondrial RFLPs .
| | Author: Abe T Edanami T Adachi E Sasahara T | | Journal: Genes Genet .
Syst Citation: V : 74 ( 1 ) P : 23-7 Year: 1999 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10549129 Accession (PMID): 10549129 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Restriction fragment length polymorphism ( RFLP ) of mitochondrial DNA in the genus Oryza was surveyed using 20 accessions including 11 species and a single endonuclease , EcoRI .
[ Sen. 2, subscore: 1.00 ]: RFLPs were visualized by Southern hybridization with eight rice mitochondrial DNA probes labeled non-radioactively with digoxigenin-dUTP .
[ Sen. 5, subscore: 1.00 ]: The extent of the polymorphism in the RFLP patterns was various depending on the probes used .
[ Sen. 10, subscore: 1.00 ]: Even in O sativa species , the RFLP patterns of japonica and indica subspecies were clearly different from each other when three probes were used .
[ Sen. 12, subscore: 1.00 ]: Within the genomes of B , BC , C , and CD , RFLP patterns were similar to each other and they showed a closer affinity except for O minuta ( BBCC ) .
| |
Score: 2.00 |
|---|
| Title: [ Molecular mapping of the S-a locus for F1 pollen sterility in cultivated rice ( Oryza sativa L ) ] | | Author: Zhuang CX Zhang GQ Mei MT Lu YG .
| | Journal: Yi Chuan Xue Bao Citation: V : 26 ( 3 ) P : 213-8 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10589160 Accession (PMID): 10589160 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: The polymorphism between T65 and TISL4 detected by RFLP and RAPD analysis was less than 1% .
[ Sen. 7, subscore: 1.00 ]: The genetic distances between S-a and RFLP markers CDO548 and RG146 are 6 . 4 cM and 7 . 2 cM respectively , and those between S-a and RAPD markers O11-1000 and Y13-500 are 6 . 8 cM and 11 . 2 cM respectively .
| |
Score: 2.00 |
|---|
| Title: [ Favorable genes and favorable genic interactions enhancing F1 fertility in indica/japonica hybrids ] | | Author: Li RH Xu CG Li XH Wang XK .
| | Journal: Yi Chuan Xue Bao Citation: V : 26 ( 3 ) P : 228-38 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10589162 Accession (PMID): 10589162 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: Polymorphism of the cross parents and another set of diverse indica or japonica lines ( as a control ) was assayed by using 92 RFLP markers .
[ Sen. 3, subscore: 1.00 ]: 41 RFLP markers were detected highly associated with indica and japonica phenotypes , which can be used as diagnostic markers to differentiate indica and japonica .
| |
Score: 3.00 |
|---|
| Title: Mapping of avirulence genes in the rice blast fungus , Magnaporthe grisea , with RFLP and RAPD markers .
| | Author: Dioh W Tharreau D Notteghem JL Orbach M Lebrun MH .
| | Journal: Mol .
Plant Microbe Interact .
Citation: V : 13 ( 2 ) P : 217-27 Year: 2000 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10659712 Accession (PMID): 10659712 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: Using 76 random progeny , we constructed a partial genetic map with restriction fragment length polymorphism ( RFLP ) markers revealed by probes such as the repeated sequences MGL/MGR583 and Pot3/MGR586 , cosmids from the M grisea genetic map , and a telomere sequence oligonucleotide .
[ Sen. 3, subscore: 1.00 ]: Avirulence genes AVR1-MedNoi and AVR1-Ku86 were closely linked to telomere RFLPs such as marker TelG ( 6 cM from AVR1-MedNoi ) and TelF ( 4 . 5 cM from AVR1-Ku86 ) .
[ Sen. 4, subscore: 1.00 ]: Avirulence gene AVR1-Irat7 was linked to a cosmid RFLP located on chromosome 1 and mapped at 20 cM from the avirulence gene AVR1-CO39 .
| |
Score: 4.00 |
|---|
| Title: High levels of gene flow and heterozygote excess characterize Rhizoctonia solani AG-1 IA ( Thanatephorus cucumeris ) from Texas .
| | Author: Rosewich UL Pettway RE McDonald BA Kistler HC .
| | Journal: Fungal Genet . Biol . Citation: V : 28 ( 3 ) P : 148-59 Year: 1999 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10669581 Accession (PMID): 10669581 | Matching Sentences:
[ Sen. 3, subscore: 1.00 ]: Seven single-copy nuclear RFLP markers were used to examine 182 isolates of Rhizoctonia solani AG-1 IA collected from six commercial rice fields in Texas .
[ Sen. 4, subscore: 1.00 ]: Thirty-six multilocus RFLP genotypes were identified .
[ Sen. 6, subscore: 1.00 ]: Tests for Hardy-Weinberg equilibrium ( HWE ) among the 36 multilocus RFLP genotypes revealed that four of the seven loci did not significantly differ from HWE .
[ Sen. 9, subscore: 1.00 ]: Possible explanations for heterozygote excess , which was observed at all seven RFLP loci , are discussed .
| |
Score: 2.00 |
|---|
| Title: Linkage group alignment of sorghum RFLP maps using a RIL mapping population .
| | Author: Subudhi PK Nguyen HT .
| | Journal: Genome Citation: V : 43 ( 2 ) P : 240-9 Year: 2000 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10791811 Accession (PMID): 10791811 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: Five major restriction fragment length polymorphism ( RFLP ) maps independently developed in this species were used for alignment purpose .
[ Sen. 8, subscore: 1.00 ]: The successful alignment of these RFLP maps will now allow selection of a large number of markers for any region of the sorghum genome with many potential applications ranging from fine mapping and marker-assisted selection to map-based cloning for the improvement of sorghum and related species .
| |
Score: 1.00 |
|---|
| Title: Identification and chromosomal localization of a transcriptionally active retrotransposon of Ty3-gypsy type in rice .
| | Author: Li ZY Chen SY Zheng XW Zhu LH .
| | Journal: Genome Citation: V : 43 ( 2 ) P : 404-8 Year: 2000 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10791831 Accession (PMID): 10791831 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: Five homologous copies of RIRE9 were assigned to five distinct positions of four chromosomes by restriction fragment length polymorphism ( RFLP ) mapping approach using an indica-japonica rice doubled-haploid ( DH ) population and its molecular linkage map .
| |
Score: 1.00 |
|---|
| Title: A high-resolution linkage map of the vicinity of the rice submergence tolerance locus Sub1 .
| | Author: Xu K Xu X Ronald PC Mackill DJ .
| | Journal: Mol . Gen . Genet . Citation: V : 263 ( 4 ) P : 681-9 Year: 2000 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10852491 Accession (PMID): 10852491 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: A population of 2950 F2 plants segregating for Sub1 was screened with two RFLP markers flanking the Sub1 locus , 2 . 4 and 4 . 9 cM away .
| |
Score: 1.00 |
|---|
| Title: Transfer of the mitochondrial rps10 gene to the nucleus in rice : acquisition of the 5 untranslated region followed by gene duplication .
| | Author: Kubo N Jordana X Ozawa K Zanlungo S Harada K Sasaki T Kadowaki K | | Journal: Mol . Gen . Genet . Citation: V : 263 ( 4 ) P : 733-9 Year: 2000 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10852496 Accession (PMID): 10852496 | Matching Sentences:
[ Sen. 8, subscore: 1.00 ]: The duplicated rps10 genes have since been translocated to different chromosomes , because the two rps10 genes were mapped on chromosomes 6 and 12 by RFLP analysis .
| |
Score: 1.00 |
|---|
| Title: [ The molecular genetic mapping of cereal crops ] | | Author: Kartel NA Malyshev SV .
| | Journal: Tsitol . Genet . Citation: V : 34 ( 2 ) P : 5-10 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10857196 Accession (PMID): 10857196 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: The application of modern methods of genetic mapping using RFLP and PCR technologies allowed to advance essentially in construction of rye genome genetic maps and mapping of some morphological and breeding-valuable genes .
| |
Score: 1.00 |
|---|
| Title: Differentiation of Tetragenococcus populations occurring in products and manufacturing processes of puffer fish ovaries fermented with rice-bran .
| | Author: Kobayashi T Kimura B Fujii T | | Journal: Int .
J Food Microbiol .
Citation: V : 56 ( 2-3 ) P : 211-8 Year: 2000 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10857547 Accession (PMID): 10857547 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: An RFLP ( restriction fragment length polymorphisms ) analysis of the 16S rRNA gene of representative strains of major groups revealed that they could be grouped into two groups : one was identified as the most prominent halophilic lactic acid coccus , Tetragenococcus halophilus , and the other as T muriaticus , which has recently been added to the genus Tetragenococcus as a new species .
| |
Score: 2.00 |
|---|
| Title: [ AFLP analysis of photoperiod-sensitive genic male sterile ( PGMS ) rice mutant lines ] | | Author: Li CY Zheng HG Weng ML Jia JH Mou TM Nguyen HT Wang B | | Journal: Sheng Wu Gong Cheng Xue Bao Citation: V : 16 ( 1 ) P : 91-5 Year: 2000 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10883285 Accession (PMID): 10883285 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: The relative efficiencies for polymorphism detection of RFLP , RAPD and AFLP were compared through the analysis between a pair of PGMS allelic mutant lines ( NK58S and NK58F ) .
[ Sen. 3, subscore: 1.00 ]: Results indicated that the efficiency for polymorphism detection in rice is in the order of AFLP > RAPD > RFLP , and also indicated that AFLP is a powerful DNA molecular marker technique for polymorphism detection , especially in the cases of extremely low polymorphism , such as isogeneic lines and allelic mutant lines .
| |
Score: 1.00 |
|---|
| Title: [ Molecular tagging of a new recessive gene for late heading in a rice cultivar 8987 ] | | Author: Li SG Ma YQ Wang WM Liu GQ Zhou KD Zhu LH .
| | Journal: Yi Chuan Xue Bao Citation: V : 27 ( 2 ) P : 133-8 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10887680 Accession (PMID): 10887680 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: The results showed that the lf gene was mapped between the two RFLP marker C213 and RG404 on chromosome 7 .
| |
Score: 1.00 |
|---|
| Title: [ A study of the genetic diversity of common wild rice ( O rufipogon Griff . ) and cultivated rice ( O sativa L ) by RFLP analysis ] | | Author: Sun CQ Wang XK Yoshimura A Iwata N | | Journal: Yi Chuan Xue Bao Citation: V : 27 ( 3 ) P : 227-34 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10887694 Accession (PMID): 10887694 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: The genetic diversity of cultivated rice and common wild rice from 10 countries in Asia were evaluated by RFLP analysis using 44 probes of single copy .
| |
Score: 1.00 |
|---|
| Title: [ Integration of the genetic map and the physical map of the subterminal region on the longer arm of rice chromosome 6 ] | | Author: Wang WM Zhai WX Chen CX Zheng XW Yan CJ Li XB Zhu LH .
| | Journal: Yi Chuan Xue Bao Citation: V : 27 ( 5 ) P : 400-8 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10979185 Accession (PMID): 10979185 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: The region between RFLP markers G342 and R1167 was the subterminal part of the longer arm on the rice chromosome 6 , because Shen et al ( 1998 ) mapped two telomeric repeat associated sequences distal to G342 .
| |
Score: 2.00 |
|---|
| Title: [ RFLP analysis on wide compatibility genes in rice variety dular of ecotype aus ] | | Author: Yan CJ Liang GH Zhu LH Gu MH .
| | Journal: Yi Chuan Xue Bao Citation: V : 27 ( 5 ) P : 409-17 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10979186 Accession (PMID): 10979186 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: Based on 109 individuals of triple cross Nanjing 11 ( indica ) //++Dular/2533 ( japonica , a marker gene line , Rc and g ) , fertile and semisterile pools were set up by bulked segregant analysis , the RFLP analysis of the two pools led to the discovery of three chromosomal segments co-segregating with fertility .
[ Sen. 12, subscore: 1.00 ]: To introgress the three WCGs into a restorer line or an abortive line will overcome the hybrid sterility barrier of indica/japonica crosses , and the precise RFLP mapping will be useful for breeders to accumulate a few genes of interest into one cultivar by means of molecular marker assisted selection .
| |
Score: 2.00 |
|---|
| Title: Isolation of a new retrotransposon-like DNA sequence and its use in analysis of diversity within the Oryza officinalis complex | | Author: Shcherban AB Vaughan DA Tomooka N | | Journal: Genetica Citation: V : 108 ( 2 ) P : 145-54 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11138942 Accession (PMID): 11138942 | Matching Sentences:
[ Sen. 3, subscore: 1.00 ]: RFLP analysis was used to study the genomic organisation of pOe . 49 among 30 accessions of the O officinalis complex using 10 restriction enzymes .
[ Sen. 4, subscore: 1.00 ]: Diversity analysis based on 120 polymorphic fragments obtained from the RFLP assay grouped the O officinalis complex accessions by genome , species and eco-geographic groups .
| |
Score: 1.00 |
|---|
| Title: Development and applications of a complete set of rice telotrisomics .
| | Author: Cheng Z Yan H Yu H Tang S Jiang J Gu M Zhu L | | Journal: Genetics Citation: V : 157 ( 1 ) P : 361-8 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11139516 Accession (PMID): 11139516 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: The identities of the extra chromosomes were further confirmed by dosage analysis of the RFLP markers on extra chromosome arms .
| |
Score: 1.00 |
|---|
| Title: Diversity and community structure within anoxic sediment from marine salinity meromictic lakes and a coastal meromictic marine basin , Vestfold Hilds , Eastern Antarctica .
| | Author: Bowman JP Rea SM McCammon SA McMeekin TA .
| | Journal: Environ . Microbiol . Citation: V : 2 ( 2 ) P : 227-37 Year: 2000 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11220308 Accession (PMID): 11220308 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: From 69 to 130 ( 555 total ) 16S rDNA clones were analysed from each sediment sample , and restriction fragment length polymorphism ( RFLP ) and sequence analysis grouped the clones into 202 distinct phylotypes ( a clone group with sequence similarity of >0 . 98 ) .
| |
Score: 1.00 |
|---|
| Title: [ Mapping genes for rice CMS-WA fertility restoration ] | | Author: Zhuang JY Fan YY Wu JL Rao ZM Xia YW Zheng KL .
| | Journal: Yi Chuan Xue Bao Citation: V : 28 ( 2 ) P : 129-34 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11233256 Accession (PMID): 11233256 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: In a population consisting of 227 test-crosses of Zhenshan 97A x ( Zhenshan 97B x Milyang 46 ) F6 , a linkage map of 115 RFLP markers was constructed and employed to detect QTL for rice CMS-WA ( wild abortive cytoplasmic male sterility ) fertility restoration .
| |
Score: 1.00 |
|---|
| Title: Toward integration of comparative genetic , physical , diversity , and cytomolecular maps for grasses and grains , using the sorghum genome as a foundation .
| | Author: Draye X Lin YR Qian XY Bowers JE Burow GB Morrell PL Peterson DG Presting GG Ren SX Wing RA Paterson AH .
| | Journal: Plant Physiol .
Citation: V : 125 ( 3 ) P : 1325-41 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11244113 Accession (PMID): 11244113 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: The small genome of sorghum ( Sorghum bicolor L Moench . ) provides an important template for study of closely related large-genome crops such as maize ( Zea mays ) and sugarcane ( Saccharum spp . ) , and is a logical complement to distantly related rice ( Oryza sativa ) as a "grass genome model . " Using a high-density RFLP map as a framework , a robust physical map of sorghum is being assembled by integrating hybridization and fingerprint data with comparative data from related taxa such as rice and using new methods to resolve genomic duplications into locus-specific groups .
| |
Score: 3.00 |
|---|
| Title: Identification of YAC clones containing the mutable slender glume locus slg in rice ( Oryza sativa L ) .
| | Author: Teraishi M Hirochika H Okumoto Y Horibata A Yamagata H Tanisaka T | | Journal: Genome Citation: V : 44 ( 1 ) P : 1-6 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11269342 Accession (PMID): 11269342 | Matching Sentences:
[ Sen. 3, subscore: 2.00 ]: The RFLP ( restriction fragment length polymorphism ) analysis revealed that the slg locus was located between two RFLP loci , XNpb33 and R1440 , on chromosome 7 with recombination values of 3 . 1% and 1 . 0% , respectively .
[ Sen. 4, subscore: 1.00 ]: Using these two RFLP loci as probes , five YAC ( yeast artificial chromosome ) clones containing either of these two loci were selected from a YAC library .
| |
Score: 2.00 |
|---|
| Title: Characterization of euploid backcross progenies derived from interspecific hybrids between Oryza sativa and O eichingeri by restriction fragment length polymorphism ( RFLP ) analysis and genomic in situ hybridization ( GISH ) .
| | Author: Yan H Liu G Cheng Z Min S Zhu L | | Journal: Genome Citation: V : 44 ( 1 ) P : 86-95 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11269361 Accession (PMID): 11269361 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Restriction fragment length polymorphism ( RFLP ) analysis and GISH ( genomic in situ hybridization ) were performed on euploid plants derived from crosses between Oryza sativa ( 2n = 24 , AA ) and two brown planthopper-resistant accessions of O eichingeri ( 2n = 24 , CC ) .
[ Sen. 2, subscore: 1.00 ]: After screening with 164 RFLP markers , 60 of the 67 euploid plants were identified as introgression lines , each carrying 1-6 small O eichingeri segments integrated on chromosomes 1 , 2 , 6 , or 10 .
| |
Score: 1.00 |
|---|
| Title: [ Construction of a bacterial artificial chromosome ( BAC ) contig encompassing the bacterial blight resistance gene Xa4 locus in rice ] | | Author: Jiang GH Wang WM Xie B Zhai WX Lu RL Zhu LH .
| | Journal: Yi Chuan Xue Bao Citation: V : 28 ( 3 ) P : 236-43 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11280997 Accession (PMID): 11280997 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: The gene Xa4 confers dominantly resistance to rice bacterial blight , which has been finely mapped between RFLP markers G181 and L1044 , and co-segregated with the resistance gene homologues sequence marker RS13 .
| |
Score: 1.00 |
|---|
| Title: [ RFLP analysis of the effect of wide compatibility genes in Aus variety Dular ] | | Author: Yi CD Yan CJ Liang GH Zhu LH Gu MH .
| | Journal: Yi Chuan Xue Bao Citation: V : 28 ( 6 ) P : 540-9 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11431987 Accession (PMID): 11431987 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: RFLP markers were employed to test whether the individuals possess wide compatibility genes ( WCGs ) in the progenies of Dular , which is one of the typical wide compatibility varieties in ecotype Aus rice .
| |
Score: 1.00 |
|---|
| Title: Mapping of QTLs associated with cytosolic glutamine synthetase and NADH-glutamate synthase in rice ( Oryza sativa L ) .
| | Author: Obara M Kajiura M Fukuta Y Yano M Hayashi M Yamaya T Sato T | | Journal: J Exp . Bot . Citation: V : 52 ( 359 ) P : 1209-17 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11432939 Accession (PMID): 11432939 | Matching Sentences:
[ Sen. 6, subscore: 1.00 ]: Furthermore , a structural gene for GS1 was mapped between two RFLP markers , C560 and C1408 , on chromosome 2 and co-located in the QTL region for one-spikelet weight .
| |
Score: 3.00 |
|---|
| Title: RAPD , RFLP and SSLP analyses of phylogenetic relationships between cultivated and wild species of rice .
| | Author: Bautista NS Solis R Kamijima O Ishii T | | Journal: Genes Genet .
Syst Citation: V : 76 ( 2 ) P : 71-9 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11434461 Accession (PMID): 11434461 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: RAPD , RFLP , nuclear SSLP and chloroplast SSLP analyses were carried out to clarify the phylogenetic relationships among A-genome species of rice .
[ Sen. 9, subscore: 1.00 ]: In addition , dendrograms for RAPD , RFLP , and nuclear and chloroplast SSLP analyses were constructed to reveal the overall genetic relationships among A-genome species .
[ Sen. 12, subscore: 1.00 ]: The results of RAPD and RFLP analyses indicate that O glumaepatula was relatively close to the groups of O sativa and O glaberrima whereas O longistaminata and O meridionalis were highly differentiated from other A-genome species .
| |
Score: 1.00 |
|---|
| Title: [ Comparison of the detection of QTL for yield traits in different generations of a rice cross using two mapping approaches ] | | Author: Zhuang JY Fan YY Wu JL Xia YW Zheng KL .
| | Journal: Yi Chuan Xue Bao Citation: V : 28 ( 5 ) P : 458-64 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11441659 Accession (PMID): 11441659 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: In the F2 and recombinant inbred populations of Zhenshan 97B/Milyang 46 , RFLP linkage maps were constructed to detect QTL for yield and its component traits .
| |
Score: 1.00 |
|---|
| Title: Construction of a 1 . 2-Mb contig including the citrus tristeza virus resistance gene locus using a bacterial artificial chromosome library of Poncirus trifoliata ( L ) Raf .
| | Author: Yang ZN Ye XR Choi S Molina J Moonan F Wing RA Roose ML Mirkov TE .
| | Journal: Genome Citation: V : 44 ( 3 ) P : 382-93 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11444697 Accession (PMID): 11444697 | Matching Sentences:
[ Sen. 8, subscore: 1.00 ]: Utilizing DNA fragments isolated from the contig as RFLP markers , the Ctv locus was further mapped to a region of ca 300 kb .
| |
Score: 1.00 |
|---|
| Title: Overdominant epistatic loci are the primary genetic basis of inbreeding depression and heterosis in rice .
I Biomass and grain yield .
| | Author: Li ZK Luo LJ Mei HW Wang DL Shu QY Tabien R Zhong DB Ying CS Stansel JW Khush GS Paterson AH .
| | Journal: Genetics Citation: V : 158 ( 4 ) P : 1737-53 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11514459 Accession (PMID): 11514459 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: To understand the genetic basis of inbreeding depression and heterosis in rice , main-effect and epistatic QTL associated with inbreeding depression and heterosis for grain yield and biomass in five related rice mapping populations were investigated using a complete RFLP linkage map of 182 markers , replicated phenotyping experiments , and the mixed model approach .
| |
Score: 1.00 |
|---|
| Title: Overdominant epistatic loci are the primary genetic basis of inbreeding depression and heterosis in rice .
II .
Grain yield components .
| | Author: Luo LJ Li ZK Mei HW Shu QY Tabien R Zhong DB Ying CS Stansel JW Khush GS Paterson AH .
| | Journal: Genetics Citation: V : 158 ( 4 ) P : 1755-71 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11514460 Accession (PMID): 11514460 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: The genetic basis underlying inbreeding depression and heterosis for three grain yield components of rice was investigated in five interrelated mapping populations using a complete RFLP linkage map , replicated phenotyping , and the mixed model approach .
| |
Score: 1.00 |
|---|
| Title: Mutagenic effects of heavy ion radiation in plants .
| | Author: Mei M Deng H Lu Y Zhuang C Liu Z Qiu Q Qiu Y Yang TC .
| | Journal: Citation: V : 14 ( 10 ) P : 363-72 Year: 1994 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11539972 Accession (PMID): 11539972 | Matching Sentences:
[ Sen. 7, subscore: 1.00 ]: RFLP analysis of two semidwarf mutants induced by argon particles revealed that large DNA alterations might be involved in these mutants .
| |
Score: 3.00 |
|---|
| Title: [ The comparison of genetic divergences and its relationships to heterosis revealed by SSR and RFLP markers in rice ( Oryza sativa L ) ] | | Author: Zhu ZF Sun CQ Jiang TB Fu Q Wang XK .
| | Journal: Yi Chuan Xue Bao Citation: V : 28 ( 8 ) P : 738-45 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11554348 Accession (PMID): 11554348 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Genetic divergences of 57 entries from 6 ecotypes of rice were surveyed by PCR analysis with 48 pairs of SSR and by Southern analysis by 50 RFLP probes .
[ Sen. 2, subscore: 1.00 ]: It was indicated that SSR markers detected polymorphism efficiently in comparison to RFLP markers , considering the allele numbers per locus and average gene diversity .
[ Sen. 3, subscore: 1.00 ]: Among all of 1 , 596 pairs , 1 , 452 pairs of genetic distances based on SSR data ( GDSSR ) were higher than the genetic distance based on RFLP data ( GDRFLP ) by average of 0 . 2492 .
| |
Score: 1.00 |
|---|
| Title: [ QTL analysis of anther length and ratio of stigma exsertion , two key traits of classification for cultivated rice ( Oryza sativa L ) and common wild rice ( O rufipogon Griff . ) ] | | Author: Li C Sun CQ Mu P Chen L Wang XK .
| | Journal: Yi Chuan Xue Bao Citation: V : 28 ( 8 ) P : 746-51 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11554349 Accession (PMID): 11554349 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: A genetic map including 120 RFLP markers covering 1418 . 2 cM has been constructed using a BC1 population derived from a cross between common wild rice ( Oryza rufipogon Griff . ) from Dongxiang , Jiangxi Province , China , and an elite Indica variety Guichao 2 .
| |
Score: 1.00 |
|---|
| Title: Marker-assisted selection for identification of plant regeneration ability of seed-derived calli in rice ( Oryza sativa L ) .
| | Author: Kwon YS Eun MY Sohn JK .
| | Journal: Mol .
Cells Citation: V : 12 ( 1 ) P : 103-6 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11561716 Accession (PMID): 11561716 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: A restriction fragment length polymorphism ( RFLP ) marker , RZ575 , that is located on chromosome 3 could effectively differentiate lines with high and poor regeneration ability , based on marker genotypes .
| |
Score: 3.00 |
|---|
| Title: Mapping of quantitative trait locus related to submergence tolerance in rice with aid of chromosome walking .
| | Author: Kamolsukyunyong W Ruanjaichon V Siangliw M Kawasaki S Sasaki T Vanavichit A Tragoonrung S | | Journal: DNA Res .
Citation: V : 8 ( 4 ) P : 163-71 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11572482 Accession (PMID): 11572482 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: The major QTL for submergence tolerance was locate in the 5 . 9 cM interval between flanking RFLP markers .
[ Sen. 5, subscore: 1.00 ]: Using one YAC end , six BAC ends and three RFLP markers , a fine-scale map was constructed of the 6 . 8-cM interval of S10709-RZ698 on rice chromosome 9 .
[ Sen. 6, subscore: 1.00 ]: The submergence tolerance and related trait were located in a small , well-defined region around BAC-end marker 180D1R and RFLP marker R1164 .
| |
Score: 1.00 |
|---|
| Title: Identification of an 85-kb DNA fragment containing pms1 , a locus for photoperiod-sensitive genic male sterility in rice .
| | Author: Liu N Shan Y Wang FP Xu CG Peng KM Li XH Zhang Q | | Journal: Mol . Genet . Genomics Citation: V : 266 ( 2 ) P : 271-5 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11683269 Accession (PMID): 11683269 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: A contig map composed of seven BAC clones spanning approximate 500 kb in length was constructed for the pms1 region by screening a BAC library of Minghui 63 DNA using RFLP markers and chromosomal walking .
| |
Score: 1.00 |
|---|
| Title: Expressional profiling of genes related to pollination and fertilization in rice .
| | Author: Chen W Tang D Suo J Zhang Y Xue Y | | Journal: C R Acad . Sci . III , Sci .
Vie Citation: V : 324 ( 12 ) P : 1111-6 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11803811 Accession (PMID): 11803811 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: DNA blot analysis of 20 URP genes detected no restriction fragment length polymorphisms ( RFLP ) between two relatively distant rice varieties , suggesting that the URP genes are highly conserved and likely play important roles in pollination and fertilization .
| |
Score: 2.00 |
|---|
| Title: An enhanced molecular marker based genetic map of perennial ryegrass ( Lolium perenne ) reveals comparative relationships with other Poaceae genomes .
| | Author: Jones ES Mahoney NL Hayward MD Armstead IP Jones JG Humphreys MO King IP Kishida T Yamada T Balfourier F Charmet G Forster JW .
| | Journal: Genome Citation: V : 45 ( 2 ) P : 282-95 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11962626 Accession (PMID): 11962626 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: RFLP , AFLP , isoenzyme , and EST data from four collaborating laboratories within the International Lolium Genome Initiative were combined to produce an integrated genetic map containing 240 loci covering 811 cM on seven linkage groups .
[ Sen. 3, subscore: 1.00 ]: The map contained 124 codominant markers , of which 109 were heterologous anchor RFLP probes from wheat , barley , oat , and rice , allowing comparative relationships between perennial ryegrass and other Poaceae species to be inferred .
| |
Score: 3.00 |
|---|
| Title: [ Identification of quantitative trait loci controlling F2 sterility and heading date in rice ] | | Author: Wang CM Yasui H Yoshimura A Wan JM Zhai HQ .
| | Journal: Yi Chuan Xue Bao Citation: V : 29 ( 4 ) P : 339-42 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11985268 Accession (PMID): 11985268 | Matching Sentences:
[ Sen. 3, subscore: 2.00 ]: The RFLP map contained 94 RFLP makers .
[ Sen. 2, subscore: 1.00 ]: At the first step , an RFLP linkage map based on the F2 lines was constructed .
| |
Score: 1.00 |
|---|
| Title: A fine physical map of the rice chromosome 4 .
| | Author: Zhao Q Zhang Y Cheng Z Chen M Wang S Feng Q Huang Y Li Y Tang Y Zhou B Chen Z Yu S Zhu J Hu X Mu J Ying K Hao P Zhang L Lu Y Zhang LS Liu Y Yu Z Fan D Weng Q Chen L Lu T Liu X Jia P Sun T Wu Y Zhang Y Lu Y Li C Wang R Lei H Li T Hu H Wu M Zhang R Guan J Zhu J Fu G Gu M Hong G Xue Y Wing R Jiang J Han B | | Journal: Genome Res .
Citation: V : 12 ( 5 ) P : 817-23 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11997348 Accession (PMID): 11997348 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: As part of an international effort to completely sequence the rice genome , we have produced a fine bacterial artificial chromosome ( BAC ) -based physical map of the Oryza sativa japonica Nipponbare chromosome 4 through an integration of 114 sequenced BAC clones from a taxonomically related subspecies O sativa indica Guangluai 4 and 182 RFLP and 407 expressed sequence tag ( EST ) markers with the fingerprinted data of the Nipponbare genome .
| |
Score: 1.00 |
|---|
| Title: Mapping QTLs associated with drought avoidance in upland rice grown in the Philippines and West Africa .
| | Author: Price AH Townend J Jones MP Audebert A Courtois B | | Journal: Plant Mol . Biol . Citation: V : 48 ( 5-6 ) P : 683-95 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11999843 Accession (PMID): 11999843 | Matching Sentences:
[ Sen. 3, subscore: 1.00 ]: A molecular map with 102 RFLP , 34 AFLP and six microsatellite markers has been used to map ( by composite interval mapping ) quantitative trait loci ( QTLs ) for the visual scores of leaf rolling and leaf drying and leaf relative water content .
| |
Score: 3.00 |
|---|
| Title: An AFLP marker tightly linked to apomixis reveals hemizygosity in a portion of the apomixis-controlling locus in Paspalum simplex | | Author: Labombarda P Busti A Caceres ME Pupilli F Arcioni S | | Journal: Genome Citation: V : 45 ( 3 ) P : 513-9 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12033620 Accession (PMID): 12033620 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: Integrating the AFLP data with those obtained previously with rice RFLP anchor markers , a map was drawn for the chromosome region of P simplex encompassing apomixis .
[ Sen. 6, subscore: 1.00 ]: Two of them revealed RFLP bands linked to apomixis together with other alleles , whereas one was proven to belong to a hemizygous portion of the apomixis locus .
[ Sen. 7, subscore: 1.00 ]: The total picture resulting from AFLP and RFLP analyses was that a cluster of markers tightly linked with apomixis was detected in P simplex together with two other markers that were more loosely linked .
| |
