56 matches found in 25 documents. Search time: 0.01 seconds. |
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Score: 6.00 | Title: The Pib gene for rice blast resistance belongs to the nucleotide binding and leucine-rich repeat class of plant disease resistance genes .
| Author: Wang ZX Yano M Yamanouchi U Iwamoto M Monna L Hayasaka H Katayose Y Sasaki T | Journal: Plant J Citation: V : 19 ( 1 ) P : 55-64 Year: 1999 Type: ARTICLE | Literature: oryza Field: abstract Doc ID: pub10417726 Accession (PMID): 10417726 | Matching Sentences: [ Sen. 4, subscore: 2.00 ]: The deduced amino acid sequence of the Pib gene product contains a nucleotide binding site ( NBS ) and leucine-rich repeats ( LRRs ) ; thus , Pib is a member of the NBS-LRR class of plant disease resistance genes . [ Sen. 2, subscore: 1.00 ]: Here we describe the isolation and characterization of Pib , one of the rice blast resistance genes . [ Sen. 3, subscore: 1.00 ]: The Pib gene was isolated by a map-based cloning strategy . [ Sen. 5, subscore: 1.00 ]: Interestingly , a duplication of the kinase 1a , 2 and 3a motifs of the NBS region was found in the N-terminal half of the Pib protein . [ Sen. 7, subscore: 1.00 ]: Pib gene expression was induced upon altered environmental conditions , such as altered temperatures and darkness .
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Score: 11.00 | Title: Expression of the Pib rice-blast-resistance gene family is up-regulated by environmental conditions favouring infection and by chemical signals that trigger secondary plant defences .
| Author: Wang ZX Yamanouchi U Katayose Y Sasaki T Yano M | Journal: Plant Mol . Biol . Citation: V : 47 ( 5 ) P : 653-61 Year: 2001 Type: ARTICLE | Literature: oryza Field: abstract Doc ID: pub11725950 Accession (PMID): 11725950 | Matching Sentences: [ Sen. 2, subscore: 5.00 ]: We describe here the isolation and characterization of a Pib homologue ( PibH8 ) , and extensive investigation of the expression of the Pib gene family ( Pib , PibH8 , HPibH8-1 , HPibH8-2 ) under various environmental and chemical treatments . [ Sen. 3, subscore: 3.00 ]: PibH8 shows 42% identity and 60% similarity to Pib and , like Pib , has a duplication of the kinase 1a , 2 , and 3a motifs of the NBS region in the N-terminal half of the protein . [ Sen. 1, subscore: 1.00 ]: The rice blast resistance gene Pib is a member of the nucleotide binding site ( NBS ) and leucine-rich repeat ( LRR ) class of plant disease resistance ( R ) genes and belongs to a small gene family . [ Sen. 4, subscore: 1.00 ]: Interestingly , genes of the Pib family exhibit a diurnal rhythm of expression . [ Sen. 7, subscore: 1.00 ]: Our findings suggest that expression of the Pib gene family is up-regulated by environmental conditions that would favour pathogen infection .
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Score: 1.00 | Title: Genetic control of rice blast resistance in the durably resistant cultivar Gumei 2 against multiple isolates .
| Author: Wu JL Fan YY Li DB Zheng KL Leung H Zhuang JY .
| Journal: Theor . Appl . Genet . Citation: V : 111 ( 1 ) P : 50-6 Year: 2005 Type: ARTICLE | Literature: oryza Field: abstract Doc ID: pub15856160 Accession (PMID): 15856160 | Matching Sentences: [ Sen. 4, subscore: 1.00 ]: Of the two genes conferring resistance against the Philippine isolates V86013 ( lineage 15 ) and C923-39 ( lineage 46 ) , we identified one as Pi26 ( t ) and mapped the other onto the distal end of chromosome 2 where Pib is located .
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Score: 4.00 | Title: Characterization of rice mutants with enhanced susceptibility to rice blast | Author: Kim HK Lee SK Cho JI Lee S An G Jwa NS Kim BR Cho YC Han SS Bhoo SH Lee YH Hong YK Yi G Park DS Hahn TR Jeon JS .
| Journal: Mol .
Cells Citation: V : 20 ( 3 ) P : 385-91 Year: 2005 Type: ARTICLE | Literature: oryza Field: abstract Doc ID: pub16404154 Accession (PMID): 16404154 | Matching Sentences: [ Sen. 8, subscore: 2.00 ]: Sequence analysis of the Pib locus amplified from three susceptible mutants revealed lesions within this gene , demonstrating that the Pi-hy gene is Pib . [ Sen. 7, subscore: 1.00 ]: High resolution mapping using 105 F2 plants revealed that the resistance gene was tightly linked , or identical , to Pib , a resistance gene with a nucleotide binding sequence and leucine-rich repeats ( NB-LRR ) previously isolated . [ Sen. 9, subscore: 1.00 ]: The Pib mutations in 1D-22-10-13 , 1D-54-16-8 , and 1C-143-16-1 were , respectively , a missense mutation in the conserved NB domain 3 , a nonsense mutation in the 5th LRR , and a nonsense mutation in the C terminus following the LRRs that causes a small deletion of the C terminus .
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Score: 1.00 | Title: Development of PCR-based allele-specific and InDel marker sets for nine rice blast resistance genes .
| Author: Hayashi K Yoshida H Ashikawa I | Journal: Citation: V : ( ) P : Year: 2006 Type: ARTICLE | Literature: oryza Field: abstract Doc ID: pub16673143 Accession (PMID): 16673143 | Matching Sentences: [ Sen. 3, subscore: 1.00 ]: We developed sets of allele-specific PCR and InDel markers for nine rice blast resistance genes-Piz , Piz-t , Pit , Pik , Pik-m , Pik-p , Pita , Pita-2 , and Pib-which are commonly used in Japanese blast resistance rice breeding programs .
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Score: 1.00 | Title: Development of PCR-based allele-specific and InDel marker sets for nine rice blast resistance genes .
| Author: Hayashi K Yoshida H Ashikawa I | Journal: Theor . Appl . Genet . Citation: V : 113 ( 2 ) P : 251-60 Year: 2006 Type: ARTICLE | Literature: oryza Field: abstract Doc ID: pub16791691 Accession (PMID): 16791691 | Matching Sentences: [ Sen. 3, subscore: 1.00 ]: We developed sets of allele-specific PCR and InDel markers for nine rice blast resistance genes -- Piz , Piz-t , Pit , Pik , Pik-m , Pik-p , Pita , Pita-2 , and Pib -- which are commonly used in Japanese blast resistance rice breeding programs .
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Score: 5.00 | Title: [ The inductive activation of the promoter of pib gene ] | Author: Li CJ Yang SH Wu L Wan JM .
| Journal: Yi Chuan Citation: V : 28 ( 6 ) P : 689-94 Year: 2006 Type: ARTICLE | Literature: oryza Field: abstract Doc ID: pub16818431 Accession (PMID): 16818431 | Matching Sentences: [ Sen. 1, subscore: 3.00 ]: A 5 . 7 kb putative promoter region of pib gene was isolated from the pib genomic clone and substituted for the 35S promoter upstream of gus gene in plasmid pCAMBIA1301 to construct a new plant expression vector pNAR604 ( putative pib promoter-GUS + 35S-hpt ) . [ Sen. 8, subscore: 2.00 ]: It was confirmed that an inductive promoter was involved in this 5 . 7 kb upstream region of pib gene , and dark , SA and NaCl treatments were inductive factors for pib promoter .
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Score: 1.00 | Title: The in silico map-based cloning of Pi36 , a rice coiled-coil nucleotide-binding site leucine-rich repeat gene that confers race-specific resistance to the blast fungus .
| Author: Liu X Lin F Wang L Pan Q | Journal: Genetics Citation: V : 176 P : Sep-41 Year: 2007 Type: MEDLINE | Literature: oryza Field: abstract Doc ID: pub17507669 Accession (PMID): 17507669 | Matching Sentences: [ Sen. 7, subscore: 1.00 ]: Pi36 is a single-copy gene in rice and is more closely related to the barley powdery mildew resistance genes Mla1 and Mla6 than to the rice blast R genes Pita , Pib , Pi9 , and Piz-t .
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Score: 1.00 | Title: The blast resistance gene Pi37 encodes a nucleotide binding site leucine-rich repeat protein and is a member of a resistance gene cluster on rice chromosome 1 .
| Author: Lin F Chen S Que Z Wang L Liu X Pan Q | Journal: Genetics Citation: V : 177 P : 1871-80 Year: 2007 Type: MEDLINE | Literature: oryza Field: abstract Doc ID: pub17947408 Accession (PMID): 17947408 | Matching Sentences: [ Sen. 11, subscore: 1.00 ]: The four Pi37 paralogs are more closely related to maize rp1 than to any of the currently isolated rice blast R genes Pita , Pib , Pi9 , Pi2 , Piz-t , and Pi36 .
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Score: 3.00 | Title: [ Initial functional analysis of the promoter region and coding region of Pib gene in transgenic rice ] | Author: Zhou M Yang SH Lan Y Jin YK Wan JM | Journal: Yi Chuan Citation: V : 30 P : 367-72 Year: 2008 Type: In-Process | Literature: oryza Field: abstract Doc ID: pub18332008 Accession (PMID): 18332008 | Matching Sentences: [ Sen. 1, subscore: 1.00 ]: The promoter region and intact coding region of Pib gene ( 9 . 9 kb ) was inserted into the downstream of CaMV 35S promoter in a binary vector pPZP2Ha3 ( + ) , resulting a plasmid pNAR701 . [ Sen. 2, subscore: 1.00 ]: And a fragment of Pib gene from 6 986 to 9 392 bp was placed into pPZP2Ha3 ( - ) under the control of CaMV 35S promoter , producing an antisense expression vector pNAR703 . [ Sen. 5, subscore: 1.00 ]: Northern blotting analysis showed the coding region of Pib gene double driven by 35S and its native promoter was able to transcript in T1 transgenic plants .
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Score: 3.00 | Title: A rice blast-resistance genetic resource from wild rice in Yunnan , China .
| Author: Yang MZ Cheng ZQ Chen SN Qian J Xu LL Huang XQ | Journal: Zhi Wu Sheng Li Yu Fen Zi Sheng Wu Xue Xue Bao Citation: V : 33 P : 589-95 Year: 2007 Type: In-Process | Literature: oryza Field: abstract Doc ID: pub18349514 Accession (PMID): 18349514 | Matching Sentences: [ Sen. 4, subscore: 1.00 ]: Another rice blast resistance gene , Pib , confers resistance to the Japanese strain of M grisea , was also confirmed to be functional in this type of O rufipogon . [ Sen. 6, subscore: 1.00 ]: The resistance of ETOR may at least partially depend upon the functioning of Pi-ta and Pib gene . [ Sen. 7, subscore: 1.00 ]: As O rufipogon has the same type of genome with the cultivated rice ( O sativa ) , Pi-ta ( + ) and Pib gene in Erect type of O rufipogon can be used to improve the tolerance of cultivated rice to blast , either by traditional hybridization or by genetic engineering .
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Score: 1.00 | Title: Development of near-isogenic Japonica rice lines with enhanced resistance to Magnaporthe grisea .
| Author: Kwon SW Cho YC Kim YG Suh JP Jeung JU Roh JH Lee SK Jeon JS Yang SJ Lee YT | Journal: Mol Cells Citation: V : 25 P : 407-16 Year: 2008 Type: In-Process | Literature: oryza Field: abstract Doc ID: pub18443412 Accession (PMID): 18443412 | Matching Sentences: [ Sen. 5, subscore: 1.00 ]: Analysis of 13 major blast resistance ( R ) genes in these lines using specific DNA markers showed that each NIL appeared to contain some combination of the four R genes , Pib , Pii , Pik-m and Pita-2 , with the first three genes being present in each line .
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Score: 1.00 | Title: Cultivar identification of Korean rice based on DNA markers for blast resistance .
| Author: Kishine M Nakamura S Matsukura U Ohtsubo K | Journal: Biosci Biotechnol Biochem Citation: V : 72 P : 2767-9 Year: 2008 Type: MEDLINE | Literature: oryza Field: abstract Doc ID: pub18838789 Accession (PMID): 18838789 | Matching Sentences: [ Sen. 2, subscore: 1.00 ]: By PCR analyses using six markers , which we developed in a previous study , and one newly-developed marker for pib , it became possible to differentiate the seven cultivars from each other .
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Score: 14.00 | Title: [ Analysis of the molecular motif for inducing response to jasmonic acid and ethylene in Pib promoter via rice transformation ] .
| Author: Yu L Yang SH Jin YK Wan JM Zhao BQ | Journal: Yi Chuan Citation: V : 32 P : 73-80 Year: 2010 Type: MEDLINE | Literature: oryza Field: abstract Doc ID: pub20085889 Accession (PMID): 20085889 | Matching Sentences: [ Sen. 2, subscore: 4.00 ]: In order to determine the necessary regions of sequence or motifs for response to jasmonic acid and ethylene in Pib promoter , the full length promoter of Pib ( -3 , 572 approximately 2 bp ) and three different 5 deletion fragments of Pib promoter ( -2 , 692 approximately 2 bp , -1 , 335 approximately 2 bp , -761 approximately 2 bp ) were synthesized by PCR and then were substituted for 35S upstream gus in a binary plasmid to construct re-combined plasmids of Pib promoter-gus fusions . [ Sen. 6, subscore: 2.00 ]: The promotion activity of the deleted Pib promoters was significantly decreased and the response to jasmonic acid or ethylene treatment was not present when the -3 , 572 approximately -2 , 692 bp sequence was knocked out from the Pib promoter . [ Sen. 9, subscore: 2.00 ]: The result of pib promoter sequence searching indicated that there was only one GCCGCC motif at -2 , 722 bp of this common deleted segment in the Pib promoter sequence . [ Sen. 10, subscore: 2.00 ]: Our rice transgenic results showed that the GCCGCC may be a cis-motif for Pib gene conferring response to jasmonic acid and ethylene for Pib gene . [ Sen. 1, subscore: 1.00 ]: The expression of Pib gene in rice was induced by hormone , such as jasmonic acid and ethylene . [ Sen. 5, subscore: 1.00 ]: The promotion activity of the full length promoter of Pib ( -3 , 572 approximately 2 bp , pNAR901 ) was the highest in the four recombinants and the gus activities in its transgenic plant organs were enhanced obviously at 6 h after treatment with jasmonic acid or ethylene . [ Sen. 7, subscore: 1.00 ]: Although the disparity in the lengths of the deleted Pib promoter of pNAR902 ( -2 , 692 approximately 2 bp ) , pNAR903 ( -1 , 335 approximately 2 bp ) , and pNAR904 ( -761 approximately 2 bp ) was more than 2 or 3 times , the response to jasmonic acid or ethylene treatment was not different among their transgenic plants . [ Sen. 8, subscore: 1.00 ]: All these results indicated that the common deleted sequences ( -3 , 572 approximately -2 , 692 bp ) in the three deleted Pib promoter constructs were the essential region to the response to jasmonic acid and ethylene treatment .
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Score: 8.00 | Title: Induced Pib Expression and Resistance to Magnaporthe grisea are Compromised by Cytosine Demethylation at Critical Promoter Regions in Rice .
| Author: Li Y Xia Q Kou H Wang D Lin X Wu Y Xu C Xing S Liu B | Journal: J Integr Plant Biol Citation: V : P : Year: 2011 Type: Publisher | Literature: oryza Field: abstract Doc ID: pub21781278 Accession (PMID): 21781278 | Matching Sentences: [ Sen. 5, subscore: 2.00 ]: Surprisingly , induced expression of Pib by M grisea infection did not entail its promoter demethylation , and partial demethylation by 5-azacytidine-treatment actually reduced Pib expression relative to wild-type plants . [ Sen. 7, subscore: 2.00 ]: In contrast , the disease susceptibility was not affected by the 5-azaC treatment in another two rice cultivars that did not contain the Pib gene , ruling out effects of other R genes and non-specific genotoxic effects by the drug-treatment as a cause for the compromised Pib-conditioned blast-resistance . [ Sen. 1, subscore: 1.00 ]: Pib is a well-characterized rice blast-resistance gene belonging to the nucleotide binding site ( NBS ) and leucine-rich repeat ( LRR ) superfamily . [ Sen. 2, subscore: 1.00 ]: Expression of Pib was low under non-challenged conditions , but strongly induced by the blast-causing fungal pathogen Magnaporthe grisea , thereby conferring resistance to the pathogen . [ Sen. 4, subscore: 1.00 ]: We report here that two critical regions of the Pib promoter were heavily CG cytosine-methylated in both cultivars studied . [ Sen. 8, subscore: 1.00 ]: Taken together , our results suggest that promoter DNA methylation plays a novel enhancing role in conditioning high-level of induced expression of the Pib gene in times of M grisea infection , and its conferred resistance to the pathogen .
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Score: 7.00 | Title: Identification of the rice blast resistance gene Pib in the National Small Grains Collection .
| Author: Roychowdhury M Jia Y Jia MH Fjellstrom R Cartwright RD | Journal: Phytopathology Citation: V : 102 P : 700-6 Year: 2012 Type: MEDLINE | Literature: oryza Field: abstract Doc ID: pub22667447 Accession (PMID): 22667447 | Matching Sentences: [ Sen. 3, subscore: 3.00 ]: The presence of Pib was evaluated with two simple sequence repeat ( SSR ) markers and a dominant marker ( Pib-dom ) derived from the Pib gene sequence . [ Sen. 1, subscore: 1.00 ]: The Pib gene in rice confers resistance to a wide range of races of the rice blast pathogen , Magnaporthe oryzae , including race IE1k that overcomes Pita , another broad-spectrum resistance gene . [ Sen. 2, subscore: 1.00 ]: In this study , the presence of Pib was determined in 164 rice germplasm accessions from a core subset of the National Small Grains Collection utilizing DNA markers and pathogenicity assays . [ Sen. 5, subscore: 1.00 ]: Of the 164 accessions evaluated , 109 contained the Pib gene as determined using both SSR markers and pathogenicity assays , albeit different haplotypes were detected . [ Sen. 6, subscore: 1.00 ]: The remaining 52 germplasm accessions were different in their responses to the blast races IB54 , IE1k , and IB1 , thus indicating the presence of R gene ( s ) other than Pib .
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Score: 1.00 | Title: Production of luteoskyrin and isolation of a new metabolite , pibasterol , from Penicillium islandicum Sopp .
| Author: Ghosh AC Manmade A Kobbe B Townsend JM Demain AL .
| Journal: Appl . Environ . Microbiol . Citation: V : 35 ( 3 ) P : 563-6 Year: 1978 Type: ARTICLE | Literature: oryza Field: abstract Doc ID: pub565188 Accession (PMID): 565188 | Matching Sentences: [ Sen. 4, subscore: 1.00 ]: A new metabolite , which we call pibasterol , was also isolated .
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Score: 1.00 | Title: The Pib gene for rice blast resistance belongs to the nucleotide binding and leucine-rich repeat class of plant disease resistance genes .
| Author: Wang ZX Yano M Yamanouchi U Iwamoto M Monna L Hayasaka H Katayose Y Sasaki T | Journal: Plant J Citation: V : 19 ( 1 ) P : 55-64 Year: 1999 Type: ARTICLE | Literature: oryza Field: title Doc ID: pub10417726 Accession (PMID): 10417726 | Matching Sentences: [ Sen. 1, subscore: 1.00 ]: The Pib gene for rice blast resistance belongs to the nucleotide binding and leucine-rich repeat class of plant disease resistance genes .
| Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 | Title: Expression of the Pib rice-blast-resistance gene family is up-regulated by environmental conditions favouring infection and by chemical signals that trigger secondary plant defences .
| Author: Wang ZX Yamanouchi U Katayose Y Sasaki T Yano M | Journal: Plant Mol . Biol . Citation: V : 47 ( 5 ) P : 653-61 Year: 2001 Type: ARTICLE | Literature: oryza Field: title Doc ID: pub11725950 Accession (PMID): 11725950 | Matching Sentences: [ Sen. 1, subscore: 1.00 ]: Expression of the Pib rice-blast-resistance gene family is up-regulated by environmental conditions favouring infection and by chemical signals that trigger secondary plant defences .
| Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 | Title: [ The inductive activation of the promoter of pib gene ] | Author: Li CJ Yang SH Wu L Wan JM .
| Journal: Yi Chuan Citation: V : 28 ( 6 ) P : 689-94 Year: 2006 Type: ARTICLE | Literature: oryza Field: title Doc ID: pub16818431 Accession (PMID): 16818431 | Matching Sentences: [ Sen. 1, subscore: 1.00 ]: [ The inductive activation of the promoter of pib gene ]
| Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 | Title: [ Initial functional analysis of the promoter region and coding region of Pib gene in transgenic rice ] | Author: Zhou M Yang SH Lan Y Jin YK Wan JM | Journal: Yi Chuan Citation: V : 30 P : 367-72 Year: 2008 Type: In-Process | Literature: oryza Field: title Doc ID: pub18332008 Accession (PMID): 18332008 | Matching Sentences: [ Sen. 1, subscore: 1.00 ]: [ Initial functional analysis of the promoter region and coding region of Pib gene in transgenic rice ]
| Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 | Title: [ Analysis of the molecular motif for inducing response to jasmonic acid and ethylene in Pib promoter via rice transformation ] .
| Author: Yu L Yang SH Jin YK Wan JM Zhao BQ | Journal: Yi Chuan Citation: V : 32 P : 73-80 Year: 2010 Type: MEDLINE | Literature: oryza Field: title Doc ID: pub20085889 Accession (PMID): 20085889 | Matching Sentences: [ Sen. 1, subscore: 1.00 ]: [ Analysis of the molecular motif for inducing response to jasmonic acid and ethylene in Pib promoter via rice transformation ] .
| Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 | Title: Induced Pib Expression and Resistance to Magnaporthe grisea are Compromised by Cytosine Demethylation at Critical Promoter Regions in Rice .
| Author: Li Y Xia Q Kou H Wang D Lin X Wu Y Xu C Xing S Liu B | Journal: J Integr Plant Biol Citation: V : P : Year: 2011 Type: Publisher | Literature: oryza Field: title Doc ID: pub21781278 Accession (PMID): 21781278 | Matching Sentences: [ Sen. 1, subscore: 1.00 ]: Induced Pib Expression and Resistance to Magnaporthe grisea are Compromised by Cytosine Demethylation at Critical Promoter Regions in Rice .
| Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 | Title: Identification of the rice blast resistance gene Pib in the National Small Grains Collection .
| Author: Roychowdhury M Jia Y Jia MH Fjellstrom R Cartwright RD | Journal: Phytopathology Citation: V : 102 P : 700-6 Year: 2012 Type: MEDLINE | Literature: oryza Field: title Doc ID: pub22667447 Accession (PMID): 22667447 | Matching Sentences: [ Sen. 1, subscore: 1.00 ]: Identification of the rice blast resistance gene Pib in the National Small Grains Collection .
| Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 | Title: Production of luteoskyrin and isolation of a new metabolite , pibasterol , from Penicillium islandicum Sopp .
| Author: Ghosh AC Manmade A Kobbe B Townsend JM Demain AL .
| Journal: Appl . Environ . Microbiol . Citation: V : 35 ( 3 ) P : 563-6 Year: 1978 Type: ARTICLE | Literature: oryza Field: title Doc ID: pub565188 Accession (PMID): 565188 | Matching Sentences: [ Sen. 1, subscore: 1.00 ]: Production of luteoskyrin and isolation of a new metabolite , pibasterol , from Penicillium islandicum Sopp .
| Supplemental links/files: reference in endnote online text related articles pubmed citation | |