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Score: 1.00 |
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| Title: A "defeated" rice resistance gene acts as a QTL against a virulent strain of Xanthomonas oryzae pv . oryzae .
| | Author: Li ZK Luo LJ Mei HW Paterson AH Zhao XH Zhong DB Wang YP Yu XQ Zhu L Tabien R Stansel JW Ying CS .
| | Journal: Mol . Gen . Genet . Citation: V : 261 ( 1 ) P : 58-63 Year: 1999 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10071210 Accession (PMID): 10071210 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: The genetic components responsible for qualitative and quantitative resistance of rice plants to three strains ( CR4 , CXO8 , and CR6 ) of Xanthomonas oryzae pv . oryzae ( Xoo ) were investigated using a set of 315 recombinant inbred lines ( RILs ) from the cross Lemont ( japonica ) x Teqing ( indica ) and a complete linkage map with 182 well distributed RFLP markers .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Application of restriction fragment fingerprinting with a rice microsatellite sequence to assembling rice YAC clones .
| | Author: Ashikawa I Kurata N Saji S Umehara Y Sasaki T | | Journal: Genome Citation: V : 42 ( 2 ) P : 330-7 Year: 1999 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10231964 Accession (PMID): 10231964 | Matching Sentences:
[ Sen. 6, subscore: 1.00 ]: We applied this method to rearranging YACs that had previously been assigned to rice chromosome 6 by anchoring with RFLP markers .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Identification of mutable slender glume gene in rice ( Oryza sativa L ) .
| | Author: Teraishi M Okumoto Y Hirochika H Horibata A Yamagata H Tanisaka T | | Journal: Mol . Gen . Genet . Citation: V : 261 ( 3 ) P : 487-94 Year: 1999 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10323229 Accession (PMID): 10323229 | Matching Sentences:
[ Sen. 6, subscore: 2.00 ]: In a subsequent RFLP analysis , slg was found to be located between the two RFLP loci XNpb20 and XNpb33 , with recombination values of 3 . 0 and 3 . 2% , respectively .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: RAPD mapping in a doubled haploid population of rice ( Oryza sativa L ) .
| | Author: Subudhi PK Huang N | | Journal: Hereditas Citation: V : 130 ( 1 ) P : 41-9 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10364828 Accession (PMID): 10364828 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: The RAPD technique provided improved marker coverage on a previously developed RFLP map .
[ Sen. 6, subscore: 1.00 ]: The RAPD analysis as a realistic and practical alternative to RFLP and their usefulness in anchoring the identified BAC contigs directly to chromosomes is discussed .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Isolation and characterization of rice MADS box gene homologues and their RFLP mapping .
| | Author: Shinozuka Y Kojima S Shomura A Ichimura H Yano M Yamamoto K Sasaki T | | Journal: DNA Res .
Citation: V : 6 ( 2 ) P : 123-9 Year: 1999 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10382970 Accession (PMID): 10382970 | Matching Sentences:
[ Sen. 9, subscore: 1.00 ]: Restriction fragment length polymorphism ( RFLP ) linkage mapping revealed that the rice MADS box gene homologues reported here are not clustered but are located throughout the genome .
[ Sen. 10, subscore: 1.00 ]: The locus of E31864 on the RFLP map was closely linked to the long sterile lemma gene , g-1 .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Physical map and organization of chromosome 7 in the rice blast fungus , Magnaporthe grisea .
| | Author: Zhu H Blackmon BP Sasinowski M Dean RA .
| | Journal: Genome Res .
Citation: V : 9 ( 8 ) P : 739-50 Year: 1999 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10447509 Accession (PMID): 10447509 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: Using 147 chromosome 7-specific single-copy BAC clones and 20 RFLP markers on chromosome 7 , 625 BAC clones were identified by hybridization .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Characterization of Astragalus sinicus rhizobia by restriction fragment length polymorphism analysis of chromosomal and nodulation genes regions .
| | Author: Guo XW Zhang XX Zhang ZM Li FD .
| | Journal: Curr . Microbiol . Citation: V : 39 ( 6 ) P : 358-0364 Year: 1999 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10525842 Accession (PMID): 10525842 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: Genotypic diversity was determined by Southern hybridization using nodDBC genes as a probe , restriction fragment length polymorphism ( RFLP ) analysis of PCR-amplified 16S-23S rDNA intergenic spacers ( IGS ) , and plasmid profile .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 5.00 |
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| Title: Phylogenetic relationships in the genus Oryza based on mitochondrial RFLPs .
| | Author: Abe T Edanami T Adachi E Sasahara T | | Journal: Genes Genet .
Syst Citation: V : 74 ( 1 ) P : 23-7 Year: 1999 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10549129 Accession (PMID): 10549129 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Restriction fragment length polymorphism ( RFLP ) of mitochondrial DNA in the genus Oryza was surveyed using 20 accessions including 11 species and a single endonuclease , EcoRI .
[ Sen. 2, subscore: 1.00 ]: RFLPs were visualized by Southern hybridization with eight rice mitochondrial DNA probes labeled non-radioactively with digoxigenin-dUTP .
[ Sen. 5, subscore: 1.00 ]: The extent of the polymorphism in the RFLP patterns was various depending on the probes used .
[ Sen. 10, subscore: 1.00 ]: Even in O sativa species , the RFLP patterns of japonica and indica subspecies were clearly different from each other when three probes were used .
[ Sen. 12, subscore: 1.00 ]: Within the genomes of B , BC , C , and CD , RFLP patterns were similar to each other and they showed a closer affinity except for O minuta ( BBCC ) .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: [ Molecular mapping of the S-a locus for F1 pollen sterility in cultivated rice ( Oryza sativa L ) ] | | Author: Zhuang CX Zhang GQ Mei MT Lu YG .
| | Journal: Yi Chuan Xue Bao Citation: V : 26 ( 3 ) P : 213-8 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10589160 Accession (PMID): 10589160 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: The polymorphism between T65 and TISL4 detected by RFLP and RAPD analysis was less than 1% .
[ Sen. 7, subscore: 1.00 ]: The genetic distances between S-a and RFLP markers CDO548 and RG146 are 6 . 4 cM and 7 . 2 cM respectively , and those between S-a and RAPD markers O11-1000 and Y13-500 are 6 . 8 cM and 11 . 2 cM respectively .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: [ Favorable genes and favorable genic interactions enhancing F1 fertility in indica/japonica hybrids ] | | Author: Li RH Xu CG Li XH Wang XK .
| | Journal: Yi Chuan Xue Bao Citation: V : 26 ( 3 ) P : 228-38 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10589162 Accession (PMID): 10589162 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: Polymorphism of the cross parents and another set of diverse indica or japonica lines ( as a control ) was assayed by using 92 RFLP markers .
[ Sen. 3, subscore: 1.00 ]: 41 RFLP markers were detected highly associated with indica and japonica phenotypes , which can be used as diagnostic markers to differentiate indica and japonica .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 3.00 |
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| Title: Mapping of avirulence genes in the rice blast fungus , Magnaporthe grisea , with RFLP and RAPD markers .
| | Author: Dioh W Tharreau D Notteghem JL Orbach M Lebrun MH .
| | Journal: Mol .
Plant Microbe Interact .
Citation: V : 13 ( 2 ) P : 217-27 Year: 2000 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10659712 Accession (PMID): 10659712 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: Using 76 random progeny , we constructed a partial genetic map with restriction fragment length polymorphism ( RFLP ) markers revealed by probes such as the repeated sequences MGL/MGR583 and Pot3/MGR586 , cosmids from the M grisea genetic map , and a telomere sequence oligonucleotide .
[ Sen. 3, subscore: 1.00 ]: Avirulence genes AVR1-MedNoi and AVR1-Ku86 were closely linked to telomere RFLPs such as marker TelG ( 6 cM from AVR1-MedNoi ) and TelF ( 4 . 5 cM from AVR1-Ku86 ) .
[ Sen. 4, subscore: 1.00 ]: Avirulence gene AVR1-Irat7 was linked to a cosmid RFLP located on chromosome 1 and mapped at 20 cM from the avirulence gene AVR1-CO39 .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 4.00 |
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| Title: High levels of gene flow and heterozygote excess characterize Rhizoctonia solani AG-1 IA ( Thanatephorus cucumeris ) from Texas .
| | Author: Rosewich UL Pettway RE McDonald BA Kistler HC .
| | Journal: Fungal Genet . Biol . Citation: V : 28 ( 3 ) P : 148-59 Year: 1999 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10669581 Accession (PMID): 10669581 | Matching Sentences:
[ Sen. 3, subscore: 1.00 ]: Seven single-copy nuclear RFLP markers were used to examine 182 isolates of Rhizoctonia solani AG-1 IA collected from six commercial rice fields in Texas .
[ Sen. 4, subscore: 1.00 ]: Thirty-six multilocus RFLP genotypes were identified .
[ Sen. 6, subscore: 1.00 ]: Tests for Hardy-Weinberg equilibrium ( HWE ) among the 36 multilocus RFLP genotypes revealed that four of the seven loci did not significantly differ from HWE .
[ Sen. 9, subscore: 1.00 ]: Possible explanations for heterozygote excess , which was observed at all seven RFLP loci , are discussed .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Linkage group alignment of sorghum RFLP maps using a RIL mapping population .
| | Author: Subudhi PK Nguyen HT .
| | Journal: Genome Citation: V : 43 ( 2 ) P : 240-9 Year: 2000 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10791811 Accession (PMID): 10791811 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: Five major restriction fragment length polymorphism ( RFLP ) maps independently developed in this species were used for alignment purpose .
[ Sen. 8, subscore: 1.00 ]: The successful alignment of these RFLP maps will now allow selection of a large number of markers for any region of the sorghum genome with many potential applications ranging from fine mapping and marker-assisted selection to map-based cloning for the improvement of sorghum and related species .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Identification and chromosomal localization of a transcriptionally active retrotransposon of Ty3-gypsy type in rice .
| | Author: Li ZY Chen SY Zheng XW Zhu LH .
| | Journal: Genome Citation: V : 43 ( 2 ) P : 404-8 Year: 2000 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10791831 Accession (PMID): 10791831 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: Five homologous copies of RIRE9 were assigned to five distinct positions of four chromosomes by restriction fragment length polymorphism ( RFLP ) mapping approach using an indica-japonica rice doubled-haploid ( DH ) population and its molecular linkage map .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: A high-resolution linkage map of the vicinity of the rice submergence tolerance locus Sub1 .
| | Author: Xu K Xu X Ronald PC Mackill DJ .
| | Journal: Mol . Gen . Genet . Citation: V : 263 ( 4 ) P : 681-9 Year: 2000 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10852491 Accession (PMID): 10852491 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: A population of 2950 F2 plants segregating for Sub1 was screened with two RFLP markers flanking the Sub1 locus , 2 . 4 and 4 . 9 cM away .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Transfer of the mitochondrial rps10 gene to the nucleus in rice : acquisition of the 5 untranslated region followed by gene duplication .
| | Author: Kubo N Jordana X Ozawa K Zanlungo S Harada K Sasaki T Kadowaki K | | Journal: Mol . Gen . Genet . Citation: V : 263 ( 4 ) P : 733-9 Year: 2000 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10852496 Accession (PMID): 10852496 | Matching Sentences:
[ Sen. 8, subscore: 1.00 ]: The duplicated rps10 genes have since been translocated to different chromosomes , because the two rps10 genes were mapped on chromosomes 6 and 12 by RFLP analysis .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: [ The molecular genetic mapping of cereal crops ] | | Author: Kartel NA Malyshev SV .
| | Journal: Tsitol . Genet . Citation: V : 34 ( 2 ) P : 5-10 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10857196 Accession (PMID): 10857196 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: The application of modern methods of genetic mapping using RFLP and PCR technologies allowed to advance essentially in construction of rye genome genetic maps and mapping of some morphological and breeding-valuable genes .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Differentiation of Tetragenococcus populations occurring in products and manufacturing processes of puffer fish ovaries fermented with rice-bran .
| | Author: Kobayashi T Kimura B Fujii T | | Journal: Int .
J Food Microbiol .
Citation: V : 56 ( 2-3 ) P : 211-8 Year: 2000 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10857547 Accession (PMID): 10857547 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: An RFLP ( restriction fragment length polymorphisms ) analysis of the 16S rRNA gene of representative strains of major groups revealed that they could be grouped into two groups : one was identified as the most prominent halophilic lactic acid coccus , Tetragenococcus halophilus , and the other as T muriaticus , which has recently been added to the genus Tetragenococcus as a new species .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: [ AFLP analysis of photoperiod-sensitive genic male sterile ( PGMS ) rice mutant lines ] | | Author: Li CY Zheng HG Weng ML Jia JH Mou TM Nguyen HT Wang B | | Journal: Sheng Wu Gong Cheng Xue Bao Citation: V : 16 ( 1 ) P : 91-5 Year: 2000 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10883285 Accession (PMID): 10883285 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: The relative efficiencies for polymorphism detection of RFLP , RAPD and AFLP were compared through the analysis between a pair of PGMS allelic mutant lines ( NK58S and NK58F ) .
[ Sen. 3, subscore: 1.00 ]: Results indicated that the efficiency for polymorphism detection in rice is in the order of AFLP > RAPD > RFLP , and also indicated that AFLP is a powerful DNA molecular marker technique for polymorphism detection , especially in the cases of extremely low polymorphism , such as isogeneic lines and allelic mutant lines .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: [ Molecular tagging of a new recessive gene for late heading in a rice cultivar 8987 ] | | Author: Li SG Ma YQ Wang WM Liu GQ Zhou KD Zhu LH .
| | Journal: Yi Chuan Xue Bao Citation: V : 27 ( 2 ) P : 133-8 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10887680 Accession (PMID): 10887680 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: The results showed that the lf gene was mapped between the two RFLP marker C213 and RG404 on chromosome 7 .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: [ A study of the genetic diversity of common wild rice ( O rufipogon Griff . ) and cultivated rice ( O sativa L ) by RFLP analysis ] | | Author: Sun CQ Wang XK Yoshimura A Iwata N | | Journal: Yi Chuan Xue Bao Citation: V : 27 ( 3 ) P : 227-34 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10887694 Accession (PMID): 10887694 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: The genetic diversity of cultivated rice and common wild rice from 10 countries in Asia were evaluated by RFLP analysis using 44 probes of single copy .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: [ Integration of the genetic map and the physical map of the subterminal region on the longer arm of rice chromosome 6 ] | | Author: Wang WM Zhai WX Chen CX Zheng XW Yan CJ Li XB Zhu LH .
| | Journal: Yi Chuan Xue Bao Citation: V : 27 ( 5 ) P : 400-8 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10979185 Accession (PMID): 10979185 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: The region between RFLP markers G342 and R1167 was the subterminal part of the longer arm on the rice chromosome 6 , because Shen et al ( 1998 ) mapped two telomeric repeat associated sequences distal to G342 .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: [ RFLP analysis on wide compatibility genes in rice variety dular of ecotype aus ] | | Author: Yan CJ Liang GH Zhu LH Gu MH .
| | Journal: Yi Chuan Xue Bao Citation: V : 27 ( 5 ) P : 409-17 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub10979186 Accession (PMID): 10979186 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: Based on 109 individuals of triple cross Nanjing 11 ( indica ) //++Dular/2533 ( japonica , a marker gene line , Rc and g ) , fertile and semisterile pools were set up by bulked segregant analysis , the RFLP analysis of the two pools led to the discovery of three chromosomal segments co-segregating with fertility .
[ Sen. 12, subscore: 1.00 ]: To introgress the three WCGs into a restorer line or an abortive line will overcome the hybrid sterility barrier of indica/japonica crosses , and the precise RFLP mapping will be useful for breeders to accumulate a few genes of interest into one cultivar by means of molecular marker assisted selection .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Isolation of a new retrotransposon-like DNA sequence and its use in analysis of diversity within the Oryza officinalis complex | | Author: Shcherban AB Vaughan DA Tomooka N | | Journal: Genetica Citation: V : 108 ( 2 ) P : 145-54 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11138942 Accession (PMID): 11138942 | Matching Sentences:
[ Sen. 3, subscore: 1.00 ]: RFLP analysis was used to study the genomic organisation of pOe . 49 among 30 accessions of the O officinalis complex using 10 restriction enzymes .
[ Sen. 4, subscore: 1.00 ]: Diversity analysis based on 120 polymorphic fragments obtained from the RFLP assay grouped the O officinalis complex accessions by genome , species and eco-geographic groups .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Development and applications of a complete set of rice telotrisomics .
| | Author: Cheng Z Yan H Yu H Tang S Jiang J Gu M Zhu L | | Journal: Genetics Citation: V : 157 ( 1 ) P : 361-8 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11139516 Accession (PMID): 11139516 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: The identities of the extra chromosomes were further confirmed by dosage analysis of the RFLP markers on extra chromosome arms .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Diversity and community structure within anoxic sediment from marine salinity meromictic lakes and a coastal meromictic marine basin , Vestfold Hilds , Eastern Antarctica .
| | Author: Bowman JP Rea SM McCammon SA McMeekin TA .
| | Journal: Environ . Microbiol . Citation: V : 2 ( 2 ) P : 227-37 Year: 2000 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11220308 Accession (PMID): 11220308 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: From 69 to 130 ( 555 total ) 16S rDNA clones were analysed from each sediment sample , and restriction fragment length polymorphism ( RFLP ) and sequence analysis grouped the clones into 202 distinct phylotypes ( a clone group with sequence similarity of >0 . 98 ) .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: [ Mapping genes for rice CMS-WA fertility restoration ] | | Author: Zhuang JY Fan YY Wu JL Rao ZM Xia YW Zheng KL .
| | Journal: Yi Chuan Xue Bao Citation: V : 28 ( 2 ) P : 129-34 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11233256 Accession (PMID): 11233256 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: In a population consisting of 227 test-crosses of Zhenshan 97A x ( Zhenshan 97B x Milyang 46 ) F6 , a linkage map of 115 RFLP markers was constructed and employed to detect QTL for rice CMS-WA ( wild abortive cytoplasmic male sterility ) fertility restoration .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Toward integration of comparative genetic , physical , diversity , and cytomolecular maps for grasses and grains , using the sorghum genome as a foundation .
| | Author: Draye X Lin YR Qian XY Bowers JE Burow GB Morrell PL Peterson DG Presting GG Ren SX Wing RA Paterson AH .
| | Journal: Plant Physiol .
Citation: V : 125 ( 3 ) P : 1325-41 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11244113 Accession (PMID): 11244113 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: The small genome of sorghum ( Sorghum bicolor L Moench . ) provides an important template for study of closely related large-genome crops such as maize ( Zea mays ) and sugarcane ( Saccharum spp . ) , and is a logical complement to distantly related rice ( Oryza sativa ) as a "grass genome model . " Using a high-density RFLP map as a framework , a robust physical map of sorghum is being assembled by integrating hybridization and fingerprint data with comparative data from related taxa such as rice and using new methods to resolve genomic duplications into locus-specific groups .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 3.00 |
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| Title: Identification of YAC clones containing the mutable slender glume locus slg in rice ( Oryza sativa L ) .
| | Author: Teraishi M Hirochika H Okumoto Y Horibata A Yamagata H Tanisaka T | | Journal: Genome Citation: V : 44 ( 1 ) P : 1-6 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11269342 Accession (PMID): 11269342 | Matching Sentences:
[ Sen. 3, subscore: 2.00 ]: The RFLP ( restriction fragment length polymorphism ) analysis revealed that the slg locus was located between two RFLP loci , XNpb33 and R1440 , on chromosome 7 with recombination values of 3 . 1% and 1 . 0% , respectively .
[ Sen. 4, subscore: 1.00 ]: Using these two RFLP loci as probes , five YAC ( yeast artificial chromosome ) clones containing either of these two loci were selected from a YAC library .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Characterization of euploid backcross progenies derived from interspecific hybrids between Oryza sativa and O eichingeri by restriction fragment length polymorphism ( RFLP ) analysis and genomic in situ hybridization ( GISH ) .
| | Author: Yan H Liu G Cheng Z Min S Zhu L | | Journal: Genome Citation: V : 44 ( 1 ) P : 86-95 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11269361 Accession (PMID): 11269361 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Restriction fragment length polymorphism ( RFLP ) analysis and GISH ( genomic in situ hybridization ) were performed on euploid plants derived from crosses between Oryza sativa ( 2n = 24 , AA ) and two brown planthopper-resistant accessions of O eichingeri ( 2n = 24 , CC ) .
[ Sen. 2, subscore: 1.00 ]: After screening with 164 RFLP markers , 60 of the 67 euploid plants were identified as introgression lines , each carrying 1-6 small O eichingeri segments integrated on chromosomes 1 , 2 , 6 , or 10 .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: [ Construction of a bacterial artificial chromosome ( BAC ) contig encompassing the bacterial blight resistance gene Xa4 locus in rice ] | | Author: Jiang GH Wang WM Xie B Zhai WX Lu RL Zhu LH .
| | Journal: Yi Chuan Xue Bao Citation: V : 28 ( 3 ) P : 236-43 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11280997 Accession (PMID): 11280997 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: The gene Xa4 confers dominantly resistance to rice bacterial blight , which has been finely mapped between RFLP markers G181 and L1044 , and co-segregated with the resistance gene homologues sequence marker RS13 .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: [ RFLP analysis of the effect of wide compatibility genes in Aus variety Dular ] | | Author: Yi CD Yan CJ Liang GH Zhu LH Gu MH .
| | Journal: Yi Chuan Xue Bao Citation: V : 28 ( 6 ) P : 540-9 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11431987 Accession (PMID): 11431987 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: RFLP markers were employed to test whether the individuals possess wide compatibility genes ( WCGs ) in the progenies of Dular , which is one of the typical wide compatibility varieties in ecotype Aus rice .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Mapping of QTLs associated with cytosolic glutamine synthetase and NADH-glutamate synthase in rice ( Oryza sativa L ) .
| | Author: Obara M Kajiura M Fukuta Y Yano M Hayashi M Yamaya T Sato T | | Journal: J Exp . Bot . Citation: V : 52 ( 359 ) P : 1209-17 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11432939 Accession (PMID): 11432939 | Matching Sentences:
[ Sen. 6, subscore: 1.00 ]: Furthermore , a structural gene for GS1 was mapped between two RFLP markers , C560 and C1408 , on chromosome 2 and co-located in the QTL region for one-spikelet weight .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 3.00 |
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| Title: RAPD , RFLP and SSLP analyses of phylogenetic relationships between cultivated and wild species of rice .
| | Author: Bautista NS Solis R Kamijima O Ishii T | | Journal: Genes Genet .
Syst Citation: V : 76 ( 2 ) P : 71-9 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11434461 Accession (PMID): 11434461 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: RAPD , RFLP , nuclear SSLP and chloroplast SSLP analyses were carried out to clarify the phylogenetic relationships among A-genome species of rice .
[ Sen. 9, subscore: 1.00 ]: In addition , dendrograms for RAPD , RFLP , and nuclear and chloroplast SSLP analyses were constructed to reveal the overall genetic relationships among A-genome species .
[ Sen. 12, subscore: 1.00 ]: The results of RAPD and RFLP analyses indicate that O glumaepatula was relatively close to the groups of O sativa and O glaberrima whereas O longistaminata and O meridionalis were highly differentiated from other A-genome species .
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Score: 1.00 |
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| Title: [ Comparison of the detection of QTL for yield traits in different generations of a rice cross using two mapping approaches ] | | Author: Zhuang JY Fan YY Wu JL Xia YW Zheng KL .
| | Journal: Yi Chuan Xue Bao Citation: V : 28 ( 5 ) P : 458-64 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11441659 Accession (PMID): 11441659 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: In the F2 and recombinant inbred populations of Zhenshan 97B/Milyang 46 , RFLP linkage maps were constructed to detect QTL for yield and its component traits .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Construction of a 1 . 2-Mb contig including the citrus tristeza virus resistance gene locus using a bacterial artificial chromosome library of Poncirus trifoliata ( L ) Raf .
| | Author: Yang ZN Ye XR Choi S Molina J Moonan F Wing RA Roose ML Mirkov TE .
| | Journal: Genome Citation: V : 44 ( 3 ) P : 382-93 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11444697 Accession (PMID): 11444697 | Matching Sentences:
[ Sen. 8, subscore: 1.00 ]: Utilizing DNA fragments isolated from the contig as RFLP markers , the Ctv locus was further mapped to a region of ca 300 kb .
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Score: 1.00 |
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| Title: Overdominant epistatic loci are the primary genetic basis of inbreeding depression and heterosis in rice .
I Biomass and grain yield .
| | Author: Li ZK Luo LJ Mei HW Wang DL Shu QY Tabien R Zhong DB Ying CS Stansel JW Khush GS Paterson AH .
| | Journal: Genetics Citation: V : 158 ( 4 ) P : 1737-53 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11514459 Accession (PMID): 11514459 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: To understand the genetic basis of inbreeding depression and heterosis in rice , main-effect and epistatic QTL associated with inbreeding depression and heterosis for grain yield and biomass in five related rice mapping populations were investigated using a complete RFLP linkage map of 182 markers , replicated phenotyping experiments , and the mixed model approach .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Overdominant epistatic loci are the primary genetic basis of inbreeding depression and heterosis in rice .
II .
Grain yield components .
| | Author: Luo LJ Li ZK Mei HW Shu QY Tabien R Zhong DB Ying CS Stansel JW Khush GS Paterson AH .
| | Journal: Genetics Citation: V : 158 ( 4 ) P : 1755-71 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11514460 Accession (PMID): 11514460 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: The genetic basis underlying inbreeding depression and heterosis for three grain yield components of rice was investigated in five interrelated mapping populations using a complete RFLP linkage map , replicated phenotyping , and the mixed model approach .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Mutagenic effects of heavy ion radiation in plants .
| | Author: Mei M Deng H Lu Y Zhuang C Liu Z Qiu Q Qiu Y Yang TC .
| | Journal: Citation: V : 14 ( 10 ) P : 363-72 Year: 1994 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11539972 Accession (PMID): 11539972 | Matching Sentences:
[ Sen. 7, subscore: 1.00 ]: RFLP analysis of two semidwarf mutants induced by argon particles revealed that large DNA alterations might be involved in these mutants .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 3.00 |
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| Title: [ The comparison of genetic divergences and its relationships to heterosis revealed by SSR and RFLP markers in rice ( Oryza sativa L ) ] | | Author: Zhu ZF Sun CQ Jiang TB Fu Q Wang XK .
| | Journal: Yi Chuan Xue Bao Citation: V : 28 ( 8 ) P : 738-45 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11554348 Accession (PMID): 11554348 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Genetic divergences of 57 entries from 6 ecotypes of rice were surveyed by PCR analysis with 48 pairs of SSR and by Southern analysis by 50 RFLP probes .
[ Sen. 2, subscore: 1.00 ]: It was indicated that SSR markers detected polymorphism efficiently in comparison to RFLP markers , considering the allele numbers per locus and average gene diversity .
[ Sen. 3, subscore: 1.00 ]: Among all of 1 , 596 pairs , 1 , 452 pairs of genetic distances based on SSR data ( GDSSR ) were higher than the genetic distance based on RFLP data ( GDRFLP ) by average of 0 . 2492 .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: [ QTL analysis of anther length and ratio of stigma exsertion , two key traits of classification for cultivated rice ( Oryza sativa L ) and common wild rice ( O rufipogon Griff . ) ] | | Author: Li C Sun CQ Mu P Chen L Wang XK .
| | Journal: Yi Chuan Xue Bao Citation: V : 28 ( 8 ) P : 746-51 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11554349 Accession (PMID): 11554349 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: A genetic map including 120 RFLP markers covering 1418 . 2 cM has been constructed using a BC1 population derived from a cross between common wild rice ( Oryza rufipogon Griff . ) from Dongxiang , Jiangxi Province , China , and an elite Indica variety Guichao 2 .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Marker-assisted selection for identification of plant regeneration ability of seed-derived calli in rice ( Oryza sativa L ) .
| | Author: Kwon YS Eun MY Sohn JK .
| | Journal: Mol .
Cells Citation: V : 12 ( 1 ) P : 103-6 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11561716 Accession (PMID): 11561716 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: A restriction fragment length polymorphism ( RFLP ) marker , RZ575 , that is located on chromosome 3 could effectively differentiate lines with high and poor regeneration ability , based on marker genotypes .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 3.00 |
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| Title: Mapping of quantitative trait locus related to submergence tolerance in rice with aid of chromosome walking .
| | Author: Kamolsukyunyong W Ruanjaichon V Siangliw M Kawasaki S Sasaki T Vanavichit A Tragoonrung S | | Journal: DNA Res .
Citation: V : 8 ( 4 ) P : 163-71 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11572482 Accession (PMID): 11572482 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: The major QTL for submergence tolerance was locate in the 5 . 9 cM interval between flanking RFLP markers .
[ Sen. 5, subscore: 1.00 ]: Using one YAC end , six BAC ends and three RFLP markers , a fine-scale map was constructed of the 6 . 8-cM interval of S10709-RZ698 on rice chromosome 9 .
[ Sen. 6, subscore: 1.00 ]: The submergence tolerance and related trait were located in a small , well-defined region around BAC-end marker 180D1R and RFLP marker R1164 .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Identification of an 85-kb DNA fragment containing pms1 , a locus for photoperiod-sensitive genic male sterility in rice .
| | Author: Liu N Shan Y Wang FP Xu CG Peng KM Li XH Zhang Q | | Journal: Mol . Genet . Genomics Citation: V : 266 ( 2 ) P : 271-5 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11683269 Accession (PMID): 11683269 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: A contig map composed of seven BAC clones spanning approximate 500 kb in length was constructed for the pms1 region by screening a BAC library of Minghui 63 DNA using RFLP markers and chromosomal walking .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Expressional profiling of genes related to pollination and fertilization in rice .
| | Author: Chen W Tang D Suo J Zhang Y Xue Y | | Journal: C R Acad . Sci . III , Sci .
Vie Citation: V : 324 ( 12 ) P : 1111-6 Year: 2001 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11803811 Accession (PMID): 11803811 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: DNA blot analysis of 20 URP genes detected no restriction fragment length polymorphisms ( RFLP ) between two relatively distant rice varieties , suggesting that the URP genes are highly conserved and likely play important roles in pollination and fertilization .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: An enhanced molecular marker based genetic map of perennial ryegrass ( Lolium perenne ) reveals comparative relationships with other Poaceae genomes .
| | Author: Jones ES Mahoney NL Hayward MD Armstead IP Jones JG Humphreys MO King IP Kishida T Yamada T Balfourier F Charmet G Forster JW .
| | Journal: Genome Citation: V : 45 ( 2 ) P : 282-95 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11962626 Accession (PMID): 11962626 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: RFLP , AFLP , isoenzyme , and EST data from four collaborating laboratories within the International Lolium Genome Initiative were combined to produce an integrated genetic map containing 240 loci covering 811 cM on seven linkage groups .
[ Sen. 3, subscore: 1.00 ]: The map contained 124 codominant markers , of which 109 were heterologous anchor RFLP probes from wheat , barley , oat , and rice , allowing comparative relationships between perennial ryegrass and other Poaceae species to be inferred .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 3.00 |
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| Title: [ Identification of quantitative trait loci controlling F2 sterility and heading date in rice ] | | Author: Wang CM Yasui H Yoshimura A Wan JM Zhai HQ .
| | Journal: Yi Chuan Xue Bao Citation: V : 29 ( 4 ) P : 339-42 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11985268 Accession (PMID): 11985268 | Matching Sentences:
[ Sen. 3, subscore: 2.00 ]: The RFLP map contained 94 RFLP makers .
[ Sen. 2, subscore: 1.00 ]: At the first step , an RFLP linkage map based on the F2 lines was constructed .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: A fine physical map of the rice chromosome 4 .
| | Author: Zhao Q Zhang Y Cheng Z Chen M Wang S Feng Q Huang Y Li Y Tang Y Zhou B Chen Z Yu S Zhu J Hu X Mu J Ying K Hao P Zhang L Lu Y Zhang LS Liu Y Yu Z Fan D Weng Q Chen L Lu T Liu X Jia P Sun T Wu Y Zhang Y Lu Y Li C Wang R Lei H Li T Hu H Wu M Zhang R Guan J Zhu J Fu G Gu M Hong G Xue Y Wing R Jiang J Han B | | Journal: Genome Res .
Citation: V : 12 ( 5 ) P : 817-23 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11997348 Accession (PMID): 11997348 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: As part of an international effort to completely sequence the rice genome , we have produced a fine bacterial artificial chromosome ( BAC ) -based physical map of the Oryza sativa japonica Nipponbare chromosome 4 through an integration of 114 sequenced BAC clones from a taxonomically related subspecies O sativa indica Guangluai 4 and 182 RFLP and 407 expressed sequence tag ( EST ) markers with the fingerprinted data of the Nipponbare genome .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Mapping QTLs associated with drought avoidance in upland rice grown in the Philippines and West Africa .
| | Author: Price AH Townend J Jones MP Audebert A Courtois B | | Journal: Plant Mol . Biol . Citation: V : 48 ( 5-6 ) P : 683-95 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub11999843 Accession (PMID): 11999843 | Matching Sentences:
[ Sen. 3, subscore: 1.00 ]: A molecular map with 102 RFLP , 34 AFLP and six microsatellite markers has been used to map ( by composite interval mapping ) quantitative trait loci ( QTLs ) for the visual scores of leaf rolling and leaf drying and leaf relative water content .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 3.00 |
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| Title: An AFLP marker tightly linked to apomixis reveals hemizygosity in a portion of the apomixis-controlling locus in Paspalum simplex | | Author: Labombarda P Busti A Caceres ME Pupilli F Arcioni S | | Journal: Genome Citation: V : 45 ( 3 ) P : 513-9 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12033620 Accession (PMID): 12033620 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: Integrating the AFLP data with those obtained previously with rice RFLP anchor markers , a map was drawn for the chromosome region of P simplex encompassing apomixis .
[ Sen. 6, subscore: 1.00 ]: Two of them revealed RFLP bands linked to apomixis together with other alleles , whereas one was proven to belong to a hemizygous portion of the apomixis locus .
[ Sen. 7, subscore: 1.00 ]: The total picture resulting from AFLP and RFLP analyses was that a cluster of markers tightly linked with apomixis was detected in P simplex together with two other markers that were more loosely linked .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Comparative mapping of the barley Ppd-H1 photoperiod response gene region , which lies close to a junction between two rice linkage segments .
| | Author: Dunford RP Yano M Kurata N Sasaki T Huestis G Rocheford T Laurie DA .
| | Journal: Genetics Citation: V : 161 ( 2 ) P : 825-34 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12072477 Accession (PMID): 12072477 | Matching Sentences:
[ Sen. 3, subscore: 1.00 ]: RFLP markers were mapped in maize to identify regions that might contain Hd2 or Ppd-H1 orthologs .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: [ Mapping of fertility-restoring genes with main effects and epistatic effects for CMS-DA in rice ] | | Author: Xie JK Zhuang JY Fan YY Tu GQ Xia YW Zheng KL .
| | Journal: Yi Chuan Xue Bao Citation: V : 29 ( 7 ) P : 616-21 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12143311 Accession (PMID): 12143311 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: A linkage map consisting of 129 RFLP and SSLP markers was constructed .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Fine mapping of a semi-dwarf gene brachytic 1 in barley .
| | Author: Li M Pan Y Li AS Kudrna D Kleinhofs A | | Journal: Yi Chuan Xue Bao Citation: V : 29 ( 7 ) P : 634-7 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12143314 Accession (PMID): 12143314 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: RFLP markers isolated from barley , wheat and rice were applied to construct a fine structure map of brachytic1 , a semi-dwarf gene located on chromosome 1 ( 7H ) short arm in barley .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Quantitative trait loci associated with leaf and neck blast resistance in recombinant inbred line population of rice ( Oryza sativa ) .
| | Author: Sirithunya P Tragoonrung S Vanavichit A Pa-In N Vongsaprom C Toojinda T | | Journal: DNA Res .
Citation: V : 9 ( 3 ) P : 79-88 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12168952 Accession (PMID): 12168952 | Matching Sentences:
[ Sen. 3, subscore: 1.00 ]: A linkage map encompassing 2112 cM was constructed from 141 RILs using 90 restriction fragment length polymorphisms ( RFLPs ) and 31 simple sequence repeats ( SSR ) .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 3.00 |
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| Title: Genetic and physical mapping of a rice blast resistance locus , Pi-CO39 ( t ) , that corresponds to the avirulence gene AVR1-CO39 of Magnaporthe grisea .
| | Author: Chauhan RS Farman ML Zhang HB Leong SA .
| | Journal: Mol . Genet . Genomics Citation: V : 267 ( 5 ) P : 603-12 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12172799 Accession (PMID): 12172799 | Matching Sentences:
[ Sen. 5, subscore: 2.00 ]: Microsatellite , RFLP and resistance gene analog ( RGA ) markers were used to map the Pi-CO39 ( t ) locus to a 1 . 2-cM interval between the probenazole-responsive ( RPR1 ) gene ( 0 . 2 cM ) and RFLP marker S2712 ( 1 . 0 cM ) on the short arm of rice chromosome 11 .
[ Sen. 6, subscore: 1.00 ]: RFLP markers G320 and F5003 , and resistance gene analogs RGA8 , RGA38 and RGACO39 were tightly linked to the Pi-CO39 ( t ) locus ( no recombination detected in a sample of 2400 gametes ) .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 3.00 |
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| Title: Molecular mapping and genetic analysis of a rice brown planthopper ( Nilaparvata lugens Stl ) resistance gene .
| | Author: Yang H Ren X Weng Q Zhu L He G | | Journal: Hereditas Citation: V : 136 ( 1 ) P : 39-43 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12184487 Accession (PMID): 12184487 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: We have determined the chromosomal location of a BPH resistance gene in rice using SSR and RFLP techniques .
[ Sen. 9, subscore: 1.00 ]: Regions surrounding the resistance gene and the SSR markers were examined with additional RFLP markers on chromosome 4 to define the location of the resistance gene .
[ Sen. 10, subscore: 1.00 ]: Linkage of RFLP markers C820 , R288 , C946 with the resistance gene further confirmed its location on the short arm of chromosome 4 .
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Score: 3.00 |
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| Title: [ Chromosome mapping of the S-b locus for F1 pollen sterility in cultivated rice ( Oryza sativa L ) with RAPD markers ] | | Author: Zhuang CX Mei MT Zhang GQ Lu YG .
| | Journal: Yi Chuan Xue Bao Citation: V : 29 ( 8 ) P : 700-5 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12200861 Accession (PMID): 12200861 | Matching Sentences:
[ Sen. 6, subscore: 1.00 ]: A total of 187 RFLP markers and 500 RAPD primers were used to screen the polymorphism between T65 and TISL2 ; only H08-1300 and Y09-1500 , two bands amplified by RAPD primer H08 and Y09 were found to be polymorphic .
[ Sen. 7, subscore: 1.00 ]: Purified H08-1300 and Y09-1500 were used as probe to hybridize with DNAs from T65 and TISL2 , and the results indicated that H08-1300 and Y09-1500 appeared to be single copy in the T65 and TISL2 genome , then the RAPD marker were successfully converted into RFLP marker .
[ Sen. 11, subscore: 1.00 ]: Clone P0033D06 had been anchored by RFLP markers R3166 that was located on 18 . 8 cM position of rice chromosome 5 by Japan Rice Genome Program , which suggested that the S-b locus was mapped on chromosome 5 and tightly linked with R3166 .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Mapping of genes controlling aluminum tolerance in rice : comparison of different genetic backgrounds .
| | Author: Nguyen VT Nguyen BD Sarkarung S Martinez C Paterson AH Nguyen HT .
| | Journal: Mol . Genet . Genomics Citation: V : 267 ( 6 ) P : 772-80 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12207224 Accession (PMID): 12207224 | Matching Sentences:
[ Sen. 3, subscore: 1.00 ]: A genetic linkage map consisting of 280 DNA markers ( RFLP , AFLP and SSR ) was constructed to determine the position and nature of quantitative trait loci ( QTLs ) affecting Al tolerance .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Marker-assisted introgression of quantitative trait loci associated with plant regeneration ability in anther culture of Rice ( Oryza sativa L ) .
| | Author: Kwon YS Kim KM Kim DH Eun MY Sohn JK .
| | Journal: Mol .
Cells Citation: V : 14 ( 1 ) P : 24-8 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12243348 Accession (PMID): 12243348 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: In order to clarify the relationship between this marker and plant regenerability , the backcross population was screened with a RFLP marker .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Identification of a 118-kb DNA fragment containing the locus of blast resistance gene Pi-2 ( t ) in rice .
| | Author: Jiang J Wang S | | Journal: Mol . Genet . Genomics Citation: V : 268 ( 2 ) P : 249-52 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12395199 Accession (PMID): 12395199 | Matching Sentences:
[ Sen. 3, subscore: 1.00 ]: Using a population of 292 recombinant inbred lines combined with bioinformatic analysis , we mapped Pi-2 ( t ) between the SSR ( simple-sequence repeat ) marker SSR140 and the RFLP ( restriction fragment length polymorphism ) marker JSH12 , 0 . 9 cM from both SSR140 and JSH12 .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Isolation of bacterial strains that produce the endocrine disruptor , octylphenol diethoxylates , in paddy fields .
| | Author: Nishio E Ichiki Y Tamura H Morita S Watanabe K Yoshikawa H | | Journal: Biosci . Biotechnol . Biochem . Citation: V : 66 ( 9 ) P : 1792-8 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12400675 Accession (PMID): 12400675 | Matching Sentences:
[ Sen. 6, subscore: 1.00 ]: The bacterial isolates were gram negative and tentatively identified as Pseudomonas putida ( 10 isolates ) and Burkholderia cepacia ( one isolate ) by BIOLOG and 16S rDNA RFLP analyses .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: [ Molecular mapping of QTLs for rice milling yield traits ] | | Author: Mei HW Luo LJ Guo LB Wang YP Yu XQ Ying CS Li ZK .
| | Journal: Yi Chuan Xue Bao Citation: V : 29 ( 9 ) P : 791-7 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12561226 Accession (PMID): 12561226 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: QTLs of three milling yield traits , including brown rice ( BR , % ) , milled rice ( MR , % ) and head milled rice ( HR , % ) , were mapped using a set of 212 Lemont/Teqing RI population , an RFLP linkage map with 182 markers and a mixed model approach ( QTLMapper V1 . 0 ) .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: [ Genetic mapping of T-DNA integration sites in Xa21 transgenic rice ] | | Author: Zhu XF Chen XW Li XB Qian Q Huang DN Zhu LH Zhai WX .
| | Journal: Yi Chuan Xue Bao Citation: V : 29 ( 10 ) P : 880-6 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12561472 Accession (PMID): 12561472 | Matching Sentences:
[ Sen. 6, subscore: 1.00 ]: Nineteen of them displayed RFLPs between the two parents , ZYQ8 and JX17 , and were mapped on the rice chromosomes , 3 , 4 , 7 , 9 , 10 , 11 and 12 , respectively .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: [ Analysis of gene expression profiles during host-Magnaporthe grisea interactions in a pair of near isogenic lines of rice ] | | Author: Rao ZM Dong HT Zhuang JY Chai RY Fan YY Li DB Zheng KL .
| | Journal: Yi Chuan Xue Bao Citation: V : 29 ( 10 ) P : 887-93 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12561473 Accession (PMID): 12561473 | Matching Sentences:
[ Sen. 3, subscore: 1.00 ]: For the genetic background , different alleles were detected on only 24 loci out of the 672 RFLP or SSLP loci surveyed .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Candidate defense genes from rice , barley , and maize and their association with qualitative and quantitative resistance in rice .
| | Author: Ramalingam J Vera Cruz CM Kukreja K Chittoor JM Wu JL Lee SW Baraoidan M George ML Cohen MB Hulbert SH Leach JE Leung H | | Journal: Mol .
Plant Microbe Interact .
Citation: V : 16 ( 1 ) P : 14-24 Year: 2003 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12580278 Accession (PMID): 12580278 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: The 118 marker loci were either polymerase chain reaction-based RGA markers or restriction fragment length polymorphism ( RFLP ) markers that included RGAs or putative DR genes from rice , barley , and maize .
[ Sen. 3, subscore: 1.00 ]: The markers were placed on an existing RFLP map generated from a mapping population of 116 doubled haploid ( DH ) lines derived from a cross between an improved indica rice cultivar , IR64 , and a traditional japonica cultivar , Azucena .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: A genetic and physical map of the region containing PLASTOCHRON1 , a heterochronic gene , in rice ( Oryza sativa L ) .
| | Author: Ahn O Miyoshi K Itoh JI Nagato Y Kurata N | | Journal: Citation: V : 105 ( 5 ) P : 654-659 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12582477 Accession (PMID): 12582477 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: In a high-resolution genetic map , the pla1-1 locus was found to map between RFLP markers C961 and R1738A on chromosome 10 , within a 3 . 6-cM genetic distance .
[ Sen. 6, subscore: 1.00 ]: PCR-based RFLP markers from BAC-end clones were developed and mapped relative to the pla1 locus .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Identification and mapping of an AFLP marker linked to Gm7 , a gall midge resistance gene and its conversion to a SCAR marker for its utility in marker aided selection in rice .
| | Author: Sardesai N Kumar A Rajyashri R Nair S Mohan M | | Journal: Citation: V : 105 ( 5 ) P : 691-698 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12582482 Accession (PMID): 12582482 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: A set of PCR primers specific to an RFLP marker , previously identified to be linked to another gall midge resistance gene Gm2 , also amplified a 1 . 5-kb ( F8LB ) fragment that is linked to Gm7 .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Comparative mapping of the wheat 5B short chromosome arm distal region with rice , relative to a crossability locus .
| | Author: Lamoureux D Boeuf C Regad F Garsmeur O Charmet G Sourdille P Lagoda P Bernard M | | Journal: Citation: V : 105 ( 5 ) P : 759-765 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12582490 Accession (PMID): 12582490 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: However a second marker , a RFLP probe , showed a break in synteny because it mapped to rice long-arm chromosomes 1 and 5 , while screening a rice BAC library with the same probe identified rice chromosomes 5 and 6 .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Mapping QTLs for field resistance to the rice blast pathogen and evaluating their individual and combined utility in improved varieties .
| | Author: Tabien E Li Z Paterson H Marchetti A Stansel W Pinson M | | Journal: Citation: V : 105 ( 2-3 ) P : 313-324 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12582534 Accession (PMID): 12582534 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: RFLP mapping using 175 well-distributed loci revealed nine QTLs , one each on chromosomes 1 , 2 , 3 , 4 , 6 , 7 and 9 , with two loci on chromosome 12 .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Fluorescent-labeled microsatellite panels useful for detecting allelic diversity in cultivated rice ( Oryza sativa L ) .
| | Author: Blair MW Hedetale V McCouch SR .
| | Journal: Citation: V : 105 ( 2-3 ) P : 449-457 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12582550 Accession (PMID): 12582550 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: The multiplex panels were shown to be useful for fingerprinting and for clustering rice varieties , and genetic associations determined in this analysis agreed well with previous isozyme and RFLP-based studies of these genotypes .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Molecular cloning , characterization , expression and chromosomal location of OsGAPDH , a submergence responsive gene in rice ( Oryza sativa L ) .
| | Author: Arumugam Pillai M Lihuang Z Akiyama T | | Journal: Citation: V : 105 ( 1 ) P : 34-42 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12582559 Accession (PMID): 12582559 | Matching Sentences:
[ Sen. 6, subscore: 1.00 ]: The chromosomal location of the OsGAPDH gene was identified by RFLP analysis indicating that OsGAPDH was located on chromosome 8 .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: QTL clusters reflect character associations in wild and cultivated rice .
| | Author: Cai W Morishima H | | Journal: Citation: V : 104 ( 8 ) P : 1217-1228 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12582574 Accession (PMID): 12582574 | Matching Sentences:
[ Sen. 3, subscore: 1.00 ]: Using 125 recombinant inbred lines ( RILs ) derived from a cross between an Indica cultivar of O sativa and a strain of O rufipogon carrying some Japonica-like characteristics , we mapped 147 markers , mostly RFLPs , on 12 chromosomes .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Isolation , characterization , and mapping of the stay green mutant in rice .
| | Author: Cha KW Lee YJ Koh HJ Lee BM Nam YW Paek NC .
| | Journal: Citation: V : 104 ( 4 ) P : 526-532 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12582654 Accession (PMID): 12582654 | Matching Sentences:
[ Sen. 8, subscore: 1.00 ]: Using phenotypic and molecular markers , we mapped the sgr ( t ) locus to the long arm of chromosome 9 between RFLP markers RG662 and C985 at 1 . 8 and 2 . 1-cM intervals , respectively .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Mapping of the QTL ( quantitative trait locus ) conferring partial resistance to leaf blast in rice cultivar Chubu 32 .
| | Author: Zenbayashi K Ashizawa T Tani T Koizumi S | | Journal: Citation: V : 104 ( 4 ) P : 547-552 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12582657 Accession (PMID): 12582657 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: The rice cultivar Chubu 32 possesses a high level of partial resistance to leaf blast The number and chromosomal location of genes conferring this resistance were detected by restriction fragment length polymorphism ( RFLP ) linkage mapping and quantitative trait locus ( QTL ) analysis .
[ Sen. 3, subscore: 1.00 ]: A linkage map covering six chromosomes and consisting of 36 RFLP markers was constructed .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: RFLP-facilitated investigation of the quantitative resistance of rice to brown planthopper ( Nilaparvata lugens ) .
| | Author: Xu XF Mei HW Luo LJ Cheng XN Li ZK .
| | Journal: Citation: V : 104 ( 2-3 ) P : 248-253 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12582694 Accession (PMID): 12582694 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Quantitative trait loci ( QTLs ) , conferring quantitative resistance to rice brown planthopper ( BPH ) , were investigated using 160 F ( 11 ) recombinant inbred lines ( RILs ) from the Lemont/Teqing cross , a complete RFLP map , and replicated phenotyping of seedbox inoculation .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Tagging and mapping of rice sheath blight resistant gene .
| | Author: Che KP Zhan QC Xing QH Wang ZP Jin DM He DJ Wang B | | Journal: Theor . Appl . Genet . Citation: V : 106 ( 2 ) P : 293-7 Year: 2003 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12582854 Accession (PMID): 12582854 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: As a result , five molecular markers , including three RFLP markers converted from RAPD and AFLP markers , and two SSR markers were identified to link with the sheath blight resistant gene .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Genetic differentiation of wild relatives of rice as assessed by RFLP analysis .
| | Author: Lu BR Zheng KL Qian HR Zhuang JY .
| | Journal: Theor . Appl . Genet . Citation: V : 106 ( 1 ) P : 101-6 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12582876 Accession (PMID): 12582876 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: To study genetic diversity and relationships of wild relatives of rice , 58 accessions of Oryza rufipogon , Oryza nivara , Oryza sativa f . spontanea and the cultivated Oryza sativa , representing a wide range of their distribution , were analyzed using the restriction fragment length polymorphism ( RFLP ) technique .
[ Sen. 2, subscore: 1.00 ]: All 30-used RFLP probes detected polymorphisms among the Oryza accessions , with an average of 3 . 8 polymorphic fragments per probe .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Substitution mapping of Pup1 : a major QTL increasing phosphorus uptake of rice from a phosphorus-deficient soil .
| | Author: Wissuwa M Wegner J Ae N Yano M | | Journal: Citation: V : 105 ( 6-7 ) P : 890-897 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12582914 Accession (PMID): 12582914 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: A conventional QTL mapping approach was based on individual F ( 2 ) RFLP data and the phenotypic evaluation of family means in the F ( 3 ) .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 3.00 |
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| Title: Genetic basis of hybrid breakdown in a Japonica/Indica cross of rice , Oryza sativa L | | Author: Kubo T Yoshimura A | | Journal: Citation: V : 105 ( 6-7 ) P : 906-911 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12582916 Accession (PMID): 12582916 | Matching Sentences:
[ Sen. 7, subscore: 2.00 ]: Based on linkage analysis with RFLP markers , the hwe1 locus was located between RFLP markers R1869 and S1437 on chromosome 12 and the hwe2 locus was located between R3192 and C1211 on chromosome 1 .
[ Sen. 3, subscore: 1.00 ]: We employed RFLP analysis in the segregating population to study the genetic basis underlying hybrid breakdown .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Genetic dissection of seed shattering , agronomic , and color traits in American wildrice ( Zizania palustris var . interior L ) with a comparative map .
| | Author: Kennard C Phillips L Porter A | | Journal: Citation: V : 105 ( 6-7 ) P : 1075-1086 Year: 2002 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12582936 Accession (PMID): 12582936 | Matching Sentences:
[ Sen. 8, subscore: 1.00 ]: The comparative map was based on mapped RFLP markers used in white rice ( Oryza sativa L ) and other grass species .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Exploiting EST databases for the development and characterization of gene-derived SSR-markers in barley ( Hordeum vulgare L ) .
| | Author: Thiel T Michalek W Varshney RK Graner A | | Journal: Theor . Appl . Genet . Citation: V : 106 ( 3 ) P : 411-22 Year: 2003 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12589540 Accession (PMID): 12589540 | Matching Sentences:
[ Sen. 11, subscore: 1.00 ]: In accordance with a previous , RFLP-based , study , spring and winter cultivars , as well as two and six-rowed barleys , formed separate clades upon PCoA analysis .
[ Sen. 12, subscore: 1.00 ]: The results show that : ( 1 ) with the software tool developed , EST databases can be efficiently exploited for the development of cDNA-SSRs , ( 2 ) EST-derived SSRs are significantly less polymorphic than those derived from genomic regions , ( 3 ) a considerable portion of the developed SSRs can be transferred to related species , and ( 4 ) compared to RFLP-markers , cDNA-SSRs yield similar patterns of genetic diversity .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Organ-specific expressions and chromosomal locations of two mitochondrial aldehyde dehydrogenase genes from rice ( Oryza sativa L ) , ALDH2a and ALDH2b .
| | Author: Tsuji H Tsutsumi N Sasaki T Hirai A Nakazono M | | Journal: Gene Citation: V : 305 ( 2 ) P : 195-204 Year: 2003 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12609740 Accession (PMID): 12609740 | Matching Sentences:
[ Sen. 6, subscore: 1.00 ]: By RFLP linkage mapping , the ALDH2a and ALDH2b genes were mapped to the long arm of chromosome 2 and the short arm of chromosome 6 , respectively .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 3.00 |
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| Title: [ Molecular mapping of the fertility restorer gene Rf-4 for WA cytoplasmic male sterility in rice ] | | Author: Zhang QY Liu YG Zhang GQ Mei MT .
| | Journal: Yi Chuan Xue Bao Citation: V : 29 ( 11 ) P : 1001-4 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12645264 Accession (PMID): 12645264 | Matching Sentences:
[ Sen. 4, subscore: 2.00 ]: YAC contigs located between RFLP markers R1877 and G2155 on chromosome 10 were confirmed by hybridization with 12 RFLP probes .
[ Sen. 8, subscore: 1.00 ]: RFLPs were screened between Zhenshan 97A and its near-isogenic lines with Rf-4Rf-4 genotype .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: High-resolution mapping of the leaf rust disease resistance gene Lr1 in wheat and characterization of BAC clones from the Lr1 locus .
| | Author: Ling HQ Zhu Y Keller B | | Journal: Theor . Appl . Genet . Citation: V : 106 ( 5 ) P : 875-82 Year: 2003 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12647062 Accession (PMID): 12647062 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: The resistance gene Lr1 was delimited in a 0 . 16-cM region between the RFLP markers ABC718 and PSR567 ( 0 . 12 cM from ABC718 and 0 . 04 cM from PSR567 ) .
[ Sen. 6, subscore: 1.00 ]: A genomic BAC library of Aegilops tauschii ( D genome ) was screened using the RFLP markers ABC718 and PSR567 .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: A new AOX homologous gene OsIM1 from rice ( Oryza sativa L ) with an alternative splicing mechanism under salt stress .
| | Author: Kong J Gong JM Zhang ZG Zhang JS Chen SY .
| | Journal: Theor . Appl . Genet . Citation: V : 107 ( 2 ) P : 326-31 Year: 2003 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12669200 Accession (PMID): 12669200 | Matching Sentences:
[ Sen. 6, subscore: 1.00 ]: RFLP analysis located it on rice chromosome 3 .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 9.00 |
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| Title: Mechanism underlying regulated expression of RFL , a conserved transcription factor , in the developing rice inflorescence .
| | Author: Prasad K Kushalappa K Vijayraghavan U | | Journal: Mech . Dev . Citation: V : 120 ( 4 ) P : 491-502 Year: 2003 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12676326 Accession (PMID): 12676326 | Matching Sentences:
[ Sen. 10, subscore: 2.00 ]: By sequence comparison of RFL upstream sequences , intron1 , intron2 and the Arabidopsis LFY promoter , we identify putative cis-regulatory elements unique to RFL .
[ Sen. 2, subscore: 1.00 ]: The spatial and temporal RNA expression pattern of a rice LFY-like gene : RFL differs significantly from that in several other species studied thus far .
[ Sen. 3, subscore: 1.00 ]: The onset of RFL expression coincides with inflorescence meristem ( panicle meristem ) initiation , and continues during panicle branching .
[ Sen. 5, subscore: 1.00 ]: To explore mechanisms underlying this distinct expression pattern , we have tested the transcription regulatory functions of sequences upstream to RFL coding sequences either alone , or together with intragenic segments .
[ Sen. 6, subscore: 1.00 ]: Sequences 3 . 0 kb upstream of the RFL reading frame do not confer correctly regulated reporter gene expression in transgenic rice .
[ Sen. 7, subscore: 1.00 ]: In contrast , RFL intron1 or 2 can individually confer the expected profile in the developing panicle and floret .
[ Sen. 9, subscore: 1.00 ]: Strikingly , RFL intron2 sequences can even utilize the Arabidopsis thaliana LFY promoter to confer regulated transcription in young rice panicles .
[ Sen. 11, subscore: 1.00 ]: These data exemplify the use of regulatory circuits specific to rice RFL that may underlie its divergent function .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Barley disease resistance gene analogs of the NBS-LRR class : identification and mapping .
| | Author: Madsen LH Collins NC Rakwalska M Backes G Sandal N Krusell L Jensen J Waterman EH Jahoor A Ayliffe M Pryor AJ Langridge P Schulze-Lefert P Stougaard J | | Journal: Mol . Genet . Genomics Citation: V : 269 ( 1 ) P : 150-61 Year: 2003 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12715163 Accession (PMID): 12715163 | Matching Sentences:
[ Sen. 8, subscore: 1.00 ]: Using a combination of RFLP and PCR marker techniques , representatives of all barley RGA gene classes were mapped in the barley genome , to all chromosomes except 4H .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Genomic distribution and characterization of EST-derived resistance gene analogs ( RGAs ) in sugarcane .
| | Author: Rossi M Araujo PG Paulet F Garsmeur O Dias VM Chen H Van Sluys MA DHont A | | Journal: Mol . Genet . Genomics Citation: V : 269 ( 3 ) P : 406-19 Year: 2003 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12733061 Accession (PMID): 12733061 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: Fifty RGAs showed a total of 148 single-dose polymorphic RFLP markers , which could be located on the sugarcane reference genetic map ( constructed in cultivar R570 , 2n=approximately 115 ) .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Mapping quantitative trait loci for yield , yield components and morphological traits in an advanced backcross population between Oryza rufipogon and the Oryza sativa cultivar Jefferson .
| | Author: Thomson MJ Tai TH McClung AM Lai XH Hinga ME Lobos KB Xu Y Martinez CP McCouch SR .
| | Journal: Theor . Appl . Genet . Citation: V : 107 ( 3 ) P : 479-93 Year: 2003 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12736777 Accession (PMID): 12736777 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: The genetic linkage map generated for this population consisted of 153 SSR and RFLP markers with an average interval size of 10 . 3 cM .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Mapping of yield-related QTLs in pepper in an interspecific cross of Capsicum annuum and C frutescens .
| | Author: Rao GU Ben Chaim A Borovsky Y Paran I | | Journal: Theor . Appl . Genet . Citation: V : 106 ( 8 ) P : 1457-66 Year: 2003 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12750789 Accession (PMID): 12750789 | Matching Sentences:
[ Sen. 3, subscore: 1.00 ]: A genetic map from this cross was constructed , based on 248 BC ( 2 ) plants and 92 restriction fragment length polymorphism ( RFLP ) markers distributed throughout the genome .
[ Sen. 8, subscore: 1.00 ]: The use of common RFLP markers in the pepper and tomato maps enabled possible orthologous QTLs in the two species to be determined .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Fine mapping of the rice thermo-sensitive genic male-sterile gene tms5 .
| | Author: Wang YG Xing QH Deng QY Liang FS Yuan LP Weng ML Wang B | | Journal: Theor . Appl . Genet . Citation: V : 107 ( 5 ) P : 917-21 Year: 2003 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12827251 Accession (PMID): 12827251 | Matching Sentences:
[ Sen. 7, subscore: 1.00 ]: The DNA sequences of the RFLP marker of C365 and G227 were found in GenBank , and on the basis of these sequences , many primers were designed to amplify the two parents and their RIL population plants .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Mapping QTLs influencing rice floral morphology using recombinant inbred lines derived from a cross between Oryza sativa L and Oryza rufipogon Griff .
| | Author: Uga Y Fukuta Y Cai HW Iwata H Ohsawa R Morishima H Fujimura T | | Journal: Theor . Appl . Genet . Citation: V : 107 ( 2 ) P : 218-26 Year: 2003 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12845437 Accession (PMID): 12845437 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: Quantitative trait loci ( QTLs ) affecting floral morphology were detected by composite interval mapping using a linkage map constructed using 147 markers , mostly RFLPs .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Mapping of quantitative trait loci associated with ultraviolet-B resistance in rice ( Oryza sativa L ) .
| | Author: Sato T Ueda T Fukuta Y Kumagai T Yano M | | Journal: Theor . Appl . Genet . Citation: V : 107 ( 6 ) P : 1003-8 Year: 2003 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12898021 Accession (PMID): 12898021 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: We used 245 RFLP markers to construct a framework linkage map .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Fine linkage mapping enables dissection of closely linked quantitative trait loci for seed dormancy and heading in rice .
| | Author: Takeuchi Y Lin SY Sasaki T Yano M | | Journal: Theor . Appl . Genet . Citation: V : 107 ( 7 ) P : 1174-80 Year: 2003 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12898024 Accession (PMID): 12898024 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: Ten BC ( 4 ) F ( 2 ) plants with recombination in the vicinity of Sdr1 and Hd8 were selected on the basis of the genotypes of the restriction fragment length polymorphism ( RFLP ) markers flanking both QTLs .
[ Sen. 7, subscore: 1.00 ]: Sdr1 was mapped between the RFLP markers R10942 and C2045 , and co-segregated with C1488 .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Mapping osmotic adjustment in an advanced back-cross inbred population of rice .
| | Author: Robin S Pathan MS Courtois B Lafitte R Carandang S Lanceras S Amante M Nguyen HT Li Z | | Journal: Theor . Appl . Genet . Citation: V : 107 ( 7 ) P : 1288-96 Year: 2003 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12920518 Accession (PMID): 12920518 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: One hundred and fifty BC ( 3 ) F ( 3 ) families were genotyped using microsatellites and RFLP markers , and a few candidate genes .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: A linkage map of meadow fescue ( Festuca pratensis Huds . ) and comparative mapping with other Poaceae species .
| | Author: Alm V Fang C Busso CS Devos KM Vollan K Grieg Z Rognli OA .
| | Journal: Theor . Appl . Genet . Citation: V : 108 ( 1 ) P : 25-40 Year: 2003 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub12923626 Accession (PMID): 12923626 | Matching Sentences:
[ Sen. 3, subscore: 1.00 ]: A total number of 550 loci have been mapped using homologous and heterologous RFLPs , AFLPs , isozymes and SSRs .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Characterization and genetic mapping of a short , highly repeated , interspersed DNA sequence from rice ( Oryza sativa L ) .
| | Author: Zhao X Kochert G | | Journal: Mol . Gen . Genet . Citation: V : 231 ( 3 ) P : 353-9 Year: 1992 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub1347144 Accession (PMID): 1347144 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: A short , highly repeated , interspersed DNA sequence from rice was characterized using a combination of techniques and genetically mapped to rice chromosomes by restriction fragment length polymorphism ( RFLP ) analysis .
[ Sen. 5, subscore: 1.00 ]: Single copy sequences flanking the repeat element were used as RFLP markers to map individual repeat elements .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 6.00 |
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| Title: Assessment of genetic diversity and population structure of Xanthomonas oryzae pv . oryzae with a repetitive DNA element .
| | Author: Leach JE Rhoads ML Vera Cruz CM White FF Mew TW Leung H | | Journal: Appl . Environ . Microbiol . Citation: V : 58 ( 7 ) P : 2188-95 Year: 1992 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub1353345 Accession (PMID): 1353345 | Matching Sentences:
[ Sen. 3, subscore: 2.00 ]: Twenty-seven RFLP types were identified ; there was no overlap of RFLP types among the six races from the Philippines .
[ Sen. 2, subscore: 1.00 ]: Genomic DNA from X oryzae pv . oryzae was digested with EcoRI and analyzed for restriction fragment length polymorphisms ( RFLPs ) with repetitive DNA element as a probe .
[ Sen. 4, subscore: 1.00 ]: Most variability ( 20 RFLP types ) was found in strains of races 1 , 2 , and 3 , which were isolated from tropical lowland areas .
[ Sen. 5, subscore: 1.00 ]: Four RFLP types ( all race 5 ) were found among strains isolated from cultivars grown in the temperate highlands .
[ Sen. 8, subscore: 1.00 ]: Cluster analysis based on RFLP banding patterns showed five groupings at 85% similarity .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Genetic and physical analysis of the rice bacterial blight disease resistance locus , Xa21 .
| | Author: Ronald PC Albano B Tabien R Abenes L Wu KS McCouch S Tanksley SD .
| | Journal: Mol . Gen . Genet . Citation: V : 236 ( 1 ) P : 113-20 Year: 1992 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub1362973 Accession (PMID): 1362973 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Nearly isogenic lines ( NILs ) of rice ( Oryza sativa ) differing at a locus conferring resistance to the pathogen Xanthomonas oryzae pv . oryzae were surveyed with 123 DNA markers and 985 random primers using restriction fragment length plymorphism ( RFLP ) and random amplified polymorphic DNA ( RAPD ) analysis .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: A high-density genetic recombination map of sequence-tagged sites for sorghum , as a framework for comparative structural and evolutionary genomics of tropical grains and grasses .
| | Author: Bowers JE Abbey C Anderson S Chang C Draye X Hoppe AH Jessup R Lemke C Lennington J Li Z Lin YR Liu SC Luo L Marler BS Ming R Mitchell SE Qiang D Reischmann K Schulze SR Skinner DN Wang YW Kresovich S Schertz KF Paterson AH .
| | Journal: Genetics Citation: V : 165 ( 1 ) P : 367-86 Year: 2003 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub14504243 Accession (PMID): 14504243 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: We report a genetic recombination map for Sorghum of 2512 loci spaced at average 0 . 4 cM ( approximately 300 kb ) intervals based on 2050 RFLP probes , including 865 heterologous probes that foster comparative genomics of Saccharum ( sugarcane ) , Zea ( maize ) , Oryza ( rice ) , Pennisetum ( millet , buffelgrass ) , the Triticeae ( wheat , barley , oat , rye ) , and Arabidopsis .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Identification of quantitative trait loci for yield and yield components in an advanced backcross population derived from the Oryza sativa variety IR64 and the wild relative O rufipogon .
| | Author: Septiningsih EM Prasetiyono J Lubis E Tai TH Tjubaryat T Moeljopawiro S McCouch SR .
| | Journal: Theor . Appl . Genet . Citation: V : 107 ( 8 ) P : 1419-32 Year: 2003 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub14513215 Accession (PMID): 14513215 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: A total of 165 markers consisting of 131 SSRs and 34 RFLPs were used to construct the genetic linkage map .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Polymorphism at the esterase isozyme locus Est10 associated with phylogenetic differentiation in rice .
| | Author: Cai H Zhang Y Xu J Zhu L Cheng K Wang X | | Journal: Genes Genet .
Syst Citation: V : 78 ( 4 ) P : 285-90 Year: 2003 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub14532707 Accession (PMID): 14532707 | Matching Sentences:
[ Sen. 8, subscore: 1.00 ]: Judging from the linkage between Est10 and RFLP marker RG220 and isozyme marker Est5 , Est10 is located on chromosome 1 .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Delimitation of the chromosomal region for a quantitative trait locus , qUVR 10 , conferring resistance to ultraviolet-B radiation in rice ( Oryza sativa L ) .
| | Author: Ueda T Sato T Numa H Yano M | | Journal: Theor . Appl . Genet . Citation: V : 108 ( 3 ) P : 385-91 Year: 2004 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub14614563 Accession (PMID): 14614563 | Matching Sentences:
[ Sen. 7, subscore: 1.00 ]: As a result , qUVR 10 was mapped between RFLP markers C60755S and C1757S , and co-segregated with C913A .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Mapping of quantitative trait loci controlling low-temperature germinability in rice ( Oryza sativa L ) .
| | Author: Fujino K Sekiguchi H Sato T Kiuchi H Nonoue Y Takeuchi Y Ando T Lin SY Yano M | | Journal: Theor . Appl . Genet . Citation: V : 108 ( 5 ) P : 794-9 Year: 2004 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub14624339 Accession (PMID): 14624339 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: Using restriction fragment length polymorphism ( RFLP ) and simple sequence repeat ( SSR ) markers , we constructed a linkage map which corresponded to about 90% of the rice genome .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Construction of a genomic library of wild rice and Agrobacterium-mediated transformation of large insert DNA linked to BPH resistance locus .
| | Author: He RF Wang Y Shi Z Ren X Zhu L Weng Q He GC .
| | Journal: Gene Citation: V : 321 ( ) P : 113-21 Year: 2003 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub14636998 Accession (PMID): 14636998 | Matching Sentences:
[ Sen. 7, subscore: 1.00 ]: Two restriction-fragment length polymorphism ( RFLP ) markers R288 and C820 , which co-segregate with brown planthopper ( BPH ) resistance gene Qbp2 , were used to screen the library , and identified seven and eight positive clones , respectively .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Comparative mapping reveals partial conservation of synteny at the apomixis locus in Paspalum spp .
| | Author: Pupilli F Martinez EJ Busti A Calderini O Quarin CL Arcioni S | | Journal: Mol . Genet . Genomics Citation: V : 270 ( 6 ) P : 539-48 Year: 2004 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub14648202 Accession (PMID): 14648202 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: A common set of RFLP markers , including five rice anchor markers previously shown to be linked to apomixis in Paspalum simplex , were used to detect linkage with apomixis in P notatum and P malacophyllum .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: [ Comparative molecular-genetic mapping of genomes of rye ( Secale cereale L ) and other cereals ] | | Author: Malyshev SV Korzun VN Zabenkova KI Volokov AV Berner A Kartel NA .
| | Journal: Tsitol . Genet . Citation: V : 37 ( 5 ) P : 9-20 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub14650323 Accession (PMID): 14650323 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: The genetic map of rye consisting of 149 RFLP , 20 isozyme and 12 microsatellite markers was developed .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Two whitebacked planthopper resistance genes in rice share the same loci with those for brown planthopper resistance .
| | Author: Tan GX Weng QM Ren X Huang Z Zhu LL He GC .
| | Journal: Heredity Citation: V : 92 ( 3 ) P : 212-7 Year: 2004 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub14666132 Accession (PMID): 14666132 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: A RFLP survey of the bulked extremes from the RIL population identified two genomic regions , one on chromosome 3 and the other on chromosome 4 , likely containing the resistance genes to planthoppers .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: [ Analysis of additive and AE interaction effects of QTLs controlling plant height , heading date and panicle number in rice ( Oryza sativa L ) ] | | Author: Yuan AP Cao LY Zhuang JY Li RZ Zheng KL Zhu J Cheng SH .
| | Journal: Yi Chuan Xue Bao Citation: V : 30 ( 10 ) P : 899-906 Year: 2003 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub14669505 Accession (PMID): 14669505 | Matching Sentences:
[ Sen. 3, subscore: 1.00 ]: A recombinant inbred line ( RIL ) population consisting of 304 individuals was derived from a cross between indica varieties Zhong156 and Gumei2 , from which a linkage map consisting of 168 RFLP , SSLP , RAPD and RGA markers that distribute on all the 12 rice chromosomes was constructed , and covers 1447 . 9 cM of the rice genome .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 5.00 |
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| Title: Partial conservation of LFY function between rice and Arabidopsis .
| | Author: Chujo A Zhang Z Kishino H Shimamoto K Kyozuka J | | Journal: Plant Cell Physiol .
Citation: V : 44 ( 12 ) P : 1311-9 Year: 2003 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub14701926 Accession (PMID): 14701926 | Matching Sentences:
[ Sen. 6, subscore: 2.00 ]: The RFL gene driven by LFY promoter partially rescued the lfy mutation , suggesting that the functions of LFY and RFL partly overlap .
[ Sen. 5, subscore: 1.00 ]: To test whether grass LFY/FLO genes have a conserved function with those of eudicots , we introduced RFL , a rice LFY homolog , into the Arabidopsis lfy mutant .
[ Sen. 7, subscore: 1.00 ]: Interestingly , the RFL but not LFY , strongly activated the expression of AP1 and AG , the downstream targets of LFY , even in the vegetative it issues .
[ Sen. 8, subscore: 1.00 ]: The LFY : : RFL transgenic Arabidopsis plants exhibited abnormal patterns of development such as leaf curling , bushy appearance and the transformation of ovules into carpels .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Comparative DNA sequence analysis of mapped wheat ESTs reveals the complexity of genome relationships between rice and wheat .
| | Author: La Rota M Sorrells ME .
| | Journal: Funct . Integr . Genomics Citation: V : 4 ( 1 ) P : 34-46 Year: 2004 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub14740255 Accession (PMID): 14740255 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: A rice genome view of the homoeologous wheat genome locations based on sequence analysis shows general similarity to the previously published comparative maps based on Southern analysis of RFLP .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Microcolinearity between a 2-cM region encompassing the grain protein content locus Gpc-6B1 on wheat chromosome 6B and a 350-kb region on rice chromosome 2 .
| | Author: Distelfeld A Uauy C Olmos S Schlatter AR Dubcovsky J Fahima T | | Journal: Funct . Integr . Genomics Citation: V : 4 ( 1 ) P : 59-66 Year: 2004 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub14752608 Accession (PMID): 14752608 | Matching Sentences:
[ Sen. 6, subscore: 2.00 ]: Colinearity between these two genomes was extended to the region proximal to Xucw67 ( eight colinear RFLP markers ) , but was interrupted distal to Xucw75 ( six non-colinear RFLP markers ) .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Sources and predictors of resolvable indel polymorphism assessed using rice as a model .
| | Author: Edwards JD Lee VM McCouch SR .
| | Journal: Mol . Genet . Genomics Citation: V : 271 ( 3 ) P : 298-307 Year: 2004 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub14758543 Accession (PMID): 14758543 | Matching Sentences:
[ Sen. 2, subscore: 2.00 ]: The likelihood of detecting indels as restriction fragment length polymorphisms ( RFLPs ) is determined by the size and frequency of the indels , and the ability to resolve small indels as RFLPs is limited by the distribution of restriction fragment sizes .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: In silico comparative analysis reveals a mosaic conservation of genes within a novel colinear region in wheat chromosome 1AS and rice chromosome 5S .
| | Author: Guyot R Yahiaoui N Feuillet C Keller B | | Journal: Funct . Integr . Genomics Citation: V : 4 ( 1 ) P : 47-58 Year: 2004 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub14767678 Accession (PMID): 14767678 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Comparative RFLP mapping has revealed extensive conservation of marker order in different grass genomes .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: BAC-FISH in wheat identifies chromosome landmarks consisting of different types of transposable elements .
| | Author: Zhang P Li W Fellers J Friebe B Gill BS .
| | Journal: Chromosoma Citation: V : 112 ( 6 ) P : 288-99 Year: 2004 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub14986017 Accession (PMID): 14986017 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: We selected 56 restriction fragment length polymorphism ( RFLP ) locus-specific BAC clones from libraries of Aegilops tauschii ( the D-genome donor of hexaploid wheat ) and A-genome diploid Triticum monococcum .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Characterization of QTLs for harvest index and source-sink characters in a DH population of rice ( Oryza sativa L ) .
| | Author: Mao BB Cai WJ Zhang ZH Hu ZL Li P Zhu LH Zhu YG .
| | Journal: Yi Chuan Xue Bao Citation: V : 30 ( 12 ) P : 1118-26 Year: 2003 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub14986429 Accession (PMID): 14986429 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: A DH population containing 81 DH lines from an indica-japonica cross of rice and an RFLP linkage map consisting of 232 markers were used to map quantitative trait loci ( QTLs ) for harvest index , biomass , grain yield , sink capacity and plant height by a computer program QTLMapper1 . 0 based on mixed linear models .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: [ Mapping of QTLs controlling chlorophyll content in rice ] | | Author: Wang B Lan T Wu WR Li WM .
| | Journal: Yi Chuan Xue Bao Citation: V : 30 ( 12 ) P : 1127-32 Year: 2003 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub14986430 Accession (PMID): 14986430 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Mapping of QTLs controlling chrolophyll content was conducted with the method of multiple-trait composite interval mapping , based on a recombinant inbred ( RI ) population consisting of 131 lines ( F10 ) derived from a cross between two indica rice varieties , Acc8558 and H359 , and on a corresponding genetic map comprising 147 RFLP and 78 AFLP markers .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 4.00 |
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| Title: Comparison of population genetic structures of common wild rice ( Oryza rufipogon Griff . ) , as revealed by analyses of quantitative traits , allozymes , and RFLPs .
| | Author: Cai HW Wang XK Morishima H | | Journal: Heredity Citation: V : 92 ( 5 ) P : 409-17 Year: 2004 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub14997180 Accession (PMID): 14997180 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: We investigated genetic diversity among and within natural populations of Asian common wild rice , Oryza rufipogon , from three different classes of data : quantitative traits , allozymes , and restriction fragment length polymorphisms ( RFLPs ) .
[ Sen. 5, subscore: 1.00 ]: Quantitative traits revealed ecotype differentiation into perennial and annual types of population , whereas allozyme and RFLP analyses revealed geographical differentiation among populations .
[ Sen. 6, subscore: 1.00 ]: These results suggest that the diversity patterns shown by quantitative trait analysis reflect mainly the occurrence of adaptive differentiation in response to habitat conditions and that those shown by allozyme and RFLP analyses reflect mainly the effect of isolation by distance .
[ Sen. 7, subscore: 1.00 ]: Population differentiation parameters ( F ( ST ) ) were highly variable among loci in allozymes as well as in RFLPs .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Molecular identification and chromosomal localization of genes encoding Triticum aestivum xylanase inhibitor I-like proteins in cereals .
| | Author: Raedschelders G Debefve C Goesaert H Delcour JA Volckaert G Van Campenhout S | | Journal: Theor . Appl . Genet . Citation: V : 109 ( 1 ) P : 112-21 Year: 2004 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub15004675 Accession (PMID): 15004675 | Matching Sentences:
[ Sen. 10, subscore: 1.00 ]: The chromosomal localization of the TAXI-I gene identified on wheat chromosome 3B , of the SCXI-II/III gene identified on rye chromosome 6R , and the presence of a cluster of TAXI-like genes on rice chromosome 1 , allowed us to assign the location of TAXI-like genes to the wheat-rye translocation area 3BL/6RL characterized by RFLP markers XGlb33 and Xpsr454 and isozyme Est-5 .
[ Sen. 11, subscore: 1.00 ]: In rice , RFLP marker C1310S corresponds to a TAXI-like protein encoding sequence .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Analysis of T-DNA Xa21 loci and bacterial blight resistance effects of the transgene Xa21 in transgenic rice .
| | Author: Zhai W Chen C Zhu X Chen X Zhang D Li X Zhu L | | Journal: Theor . Appl . Genet . Citation: V : 109 ( 3 ) P : 534-42 Year: 2004 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub15088086 Accession (PMID): 15088086 | Matching Sentences:
[ Sen. 8, subscore: 1.00 ]: They displayed restriction fragment length polymorphisms ( RFLPs ) between two rice varieties , ZYQ8 and JX17 , and were mapped on rice chromosomes 1 , 3 , 4 , 5 , 7 , 9 , 10 , 11 and 12 , respectively , by using a double haploid population derived from a cross between ZYQ8 and JX17 .
[ Sen. 9, subscore: 1.00 ]: The blast search and homology comparison of the rice T-DNA flanking sequences with the rice chromosome-anchored sequence database confirmed the RFLP mapping results .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Saturation mapping of QTL regions and identification of putative candidate genes for drought tolerance in rice .
| | Author: Nguyen TT Klueva N Chamareck V Aarti A Magpantay G Millena AC Pathan MS Nguyen HT .
| | Journal: Mol . Genet . Genomics Citation: V : 272 ( 1 ) P : 35-46 Year: 2004 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub15221451 Accession (PMID): 15221451 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: We have developed 85 new markers ( 50 RFLPs , 5 SSRs , 12 DD cDNAs , 9 ESTs , 8 HSP-encoding cDNAs and one BSA-derived AFLP marker ) for saturation mapping of QTL regions for drought tolerance in rice , in our efforts to identify putative candidate genes .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: QTL detection for rice grain quality traits using an interspecific backcross population derived from cultivated Asian ( O sativa L ) and African ( O glaberrima S ) rice .
| | Author: Li J Xiao J Grandillo S Jiang L Wan Y Deng Q Yuan L McCouch SR .
| | Journal: Genome Citation: V : 47 ( 4 ) P : 697-704 Year: 2004 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub15284874 Accession (PMID): 15284874 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: A total of 308 BC3F1 hybrid families were evaluated for 16 grain-related traits under field conditions in Changsha , China , and the same families were evaluated for RFLP and SSR marker segregation at Cornell University ( Ithaca , NY ) .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Extension of the Messapia x dicoccoides linkage map of Triticum turgidum ( L ) Thell .
| | Author: Blanco A Simeone R Cenci A Gadaleta A Tanzarella OA Porceddu E Salvi S Tuberosa R Figliuolo G Spagnoletti P Rder MS Korzun V | | Journal: Cell . Mol . Biol . Lett . Citation: V : 9 ( 3 ) P : 529-41 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub15332129 Accession (PMID): 15332129 | Matching Sentences:
[ Sen. 3, subscore: 1.00 ]: These loci include 261 Restriction Fragment Length Polymorphisms ( RFLPs ) , 91 microsatellites ( Simple Sequence Repeats , SSRs ) , 87 Amplified Fragment Length Polymorphisms ( AFLPs ) , two ribosomal genes , and nine biochemical ( seven seed storage proteins and two isozymes ) and eight morphological markers .
[ Sen. 11, subscore: 1.00 ]: The durum wheat map was compared with the published maps of bread and durum wheats ; the order of most common RFLP and SSR markers on the 14 chromosomes of the A and B genomes were nearly identical A core-map can be extracted from the high-density Messapia x dicoccoides map and a subset of uniformly distributed markers can be used to detect and map quantitative trait loci .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: [ QTL analysis for lodging resistance in rice using a DH population under lowland and upland ecosystems ] | | Author: Mu P Li ZC Li CP Zhang HL Wang XK .
| | Journal: Yi Chuan Xue Bao Citation: V : 31 ( 7 ) P : 717-23 Year: 2004 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub15473324 Accession (PMID): 15473324 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: Data from upland and lowland ecosystems were analyzed respectively and jointly , based on a constructed molecular linkage map ( including 94 RFLP markers and 71 SSR markers and covering 1 535 .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: [ Mapping of a new resistance gene to bacterial blight in rice line introgressed from Oryza officinalis ] | | Author: Tan GX Ren X Weng QM Shi ZY Zhu LL He GC .
| | Journal: Yi Chuan Xue Bao Citation: V : 31 ( 7 ) P : 724-9 Year: 2004 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub15473325 Accession (PMID): 15473325 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: In this study , the resistance to bacterial blight of 187 recombinant inbred lines ( RILs ) from a cross between B5 and Minghui63 were evaluated and RFLP markers linked to the resistance gene were identified by bulked segregant analysis .
[ Sen. 4, subscore: 1.00 ]: 3 cM region flanked by RFLP markers C904 and R596 on chromosome 1 .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: High-resolution mapping of the S and Z loci of Phalaris coerulescens .
| | Author: Bian XY Friedrich A Bai JR Baumann U Hayman DL Barker SJ Langridge P | | Journal: Genome Citation: V : 47 ( 5 ) P : 918-30 Year: 2004 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub15499406 Accession (PMID): 15499406 | Matching Sentences:
[ Sen. 3, subscore: 1.00 ]: As part of a map-based cloning strategy , high-resolution maps of the S and Z regions were generated from distorted segregating populations using RFLP probes from wheat , barley , oat , and Phalaris .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Epistasis underlying female sterility detected in hybrid breakdown in a Japonica-Indica cross of rice ( Oryza sativa L ) .
| | Author: Kubo T Yoshimura A | | Journal: Theor . Appl . Genet . Citation: V : 110 ( 2 ) P : 346-55 Year: 2005 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub15549230 Accession (PMID): 15549230 | Matching Sentences:
[ Sen. 7, subscore: 1.00 ]: The Indica parent IR24 has a sterile allele , hsa1-IR , which was located at near RFLP marker G148 on chromosome 12 , whereas the Japonica parent Asominori has two sterile alleles , hsa2-As on chromosome 8 ( close to G104 ) and hsa3-As on chromosome 9 ( close to RM285 ) .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Phenotypic and genotypic characterisation of Bacillus cereus isolates from Bangladeshi rice .
| | Author: Haque A Russell NJ .
| | Journal: Int .
J Food Microbiol .
Citation: V : 98 ( 1 ) P : 23-34 Year: 2005 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub15617798 Accession (PMID): 15617798 | Matching Sentences:
[ Sen. 10, subscore: 1.00 ]: Restriction fragment length polymorphism ( RFLP ) analysis of the spacer region between the 16S and 23S rRNA genes yielded two groups based on different base sequences , whereas sequence analysis of variable regions in the 16S rRNA gene gave four different groups by base differences at two positions .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: [ Analysis and mapping of a rice repeated sequence ] | | Author: Jiang L Zheng XW Zhang XH Han JM Dong JG Zhai WX .
| | Journal: Yi Chuan Citation: V : 25 ( 6 ) P : 691-4 Year: 2003 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub15639961 Accession (PMID): 15639961 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: The tandom repeated DH17 sequence was mapped on the long arm end of chromosome 12 through RFLP analysis of a double haploid population derived from ZYQ8 and JX17 using DH17 as a probe .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: [ Stable expression of QTL for grain shape of milled rice ( Oryza sativa L ) using a CSSLs population ] | | Author: Wan XY Liu SJ Wang CM Jiang L Zhai HQ Atsushi Y Wan JM .
| | Journal: Yi Chuan Xue Bao Citation: V : 31 ( 11 ) P : 1275-83 Year: 2004 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub15651681 Accession (PMID): 15651681 | Matching Sentences:
[ Sen. 9, subscore: 2.00 ]: Since QTL qGL-3 and qLWR-3 were mapped in the R19-C1677 interval , qGW-5a and qLWR-5a in the vicinity of RFLP marker C263 , qGW-5b and qLWR-5b near R569 , the four RFLP markers , R19 , C1677 , C263 and R569 , would be useful for further marker-assisted selection ( MAS ) in rice quality improvement .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Identification of candidate markers associated with agronomic traits in rice using discriminant analysis .
| | Author: Zhang N Xu Y Akash M McCouch S Oard JH .
| | Journal: Theor . Appl . Genet . Citation: V : 110 ( 4 ) P : 721-9 Year: 2005 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub15678327 Accession (PMID): 15678327 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: Agronomic data were collected for 12 economically important traits , and DNA profiles of each inbred line were produced using 60 SSR and 114 RFLP markers .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Targeting the aluminum tolerance gene Alt3 region in rye , using rice/rye micro-colinearity .
| | Author: Miftahudin Chikmawati T Ross K Scoles GJ Gustafson JP .
| | Journal: Theor . Appl . Genet . Citation: V : 110 ( 5 ) P : 906-13 Year: 2005 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub15688201 Accession (PMID): 15688201 | Matching Sentences:
[ Sen. 6, subscore: 1.00 ]: Four additional RFLP markers developed from rice genes/putative genes , spanning 10 kb of a 160-kb rice BAC , were mapped to the Alt3 region .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: A high-density genetic map of hexaploid wheat ( Triticum aestivum L ) from the cross Chinese Spring x SQ1 and its use to compare QTLs for grain yield across a range of environments .
| | Author: Quarrie SA Steed A Calestani C Semikhodskii A Lebreton C Chinoy C Steele N PljevljakusiED Waterman E Weyen J Schondelmaier J Habash DZ Farmer P Saker L Clarkson DT Abugalieva A Yessimbekova M Turuspekov Y Abugalieva S Tuberosa R Sanguineti MC Hollington PA Aragus R Royo A Dodig D | | Journal: Theor . Appl . Genet . Citation: V : 110 ( 5 ) P : 865-80 Year: 2005 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub15719212 Accession (PMID): 15719212 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: A population of 96 doubled haploid lines ( DHLs ) was prepared from F1 plants of the hexaploid wheat cross Chinese Spring x SQ1 ( a high abscisic acid-expressing breeding line ) and was mapped with 567 RFLP , AFLP , SSR , morphological and biochemical markers covering all 21 chromosomes , with a total map length of 3 , 522 cM .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Nonrandom distribution and frequencies of genomic and EST-derived microsatellite markers in rice , wheat , and barley .
| | Author: La Rota M Kantety RV Yu JK Sorrells ME .
| | Journal: BMC Genomics Citation: V : 6 ( 1 ) P : 23 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub15720707 Accession (PMID): 15720707 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: The low number of polymorphic RFLP markers has limited the development of dense genetic maps in wheat and the number of available anchor points in comparative maps .
[ Sen. 10, subscore: 1.00 ]: Microsatellite markers derived from the use of non-redundant EST-SSRs are an economic and efficient alternative to RFLP for comparative mapping in cereals .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Chromosomal rearrangements differentiating the ryegrass genome from the Triticeae , oat , and rice genomes using common heterologous RFLP probes .
| | Author: Sim S Chang T Curley J Warnke SE Barker RE Jung G | | Journal: Theor . Appl . Genet . Citation: V : 110 ( 6 ) P : 1011-9 Year: 2005 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub15742203 Accession (PMID): 15742203 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: An restriction fragment length polymorphism ( RFLP ) -based genetic map of ryegrass ( Lolium ) was constructed for comparative mapping with other Poaceae species using heterologous anchor probes .
[ Sen. 2, subscore: 1.00 ]: The genetic map contained 120 RFLP markers from cDNA clones of barley ( Hordeum vulgare L ) , oat ( Avena sativa L ) , and rice ( Oryza sativa L ) , covering 664 cM on seven linkage groups ( LGs ) .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Molecular genetic analysis of QTLs for ferulic acid content in dried straw of rice ( Oryza sativa L ) .
| | Author: Dong Y Tsuzuki E Kamiunten H Lin D Terao H Matsuo M Cheng S | | Journal: Biochem . Genet . Citation: V : 43 ( 1-2 ) P : 25-34 Year: 2005 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub15859517 Accession (PMID): 15859517 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: This study was conducted to determine the genetic basis controlling the ferulic acid content of rice straw in a recombinant inbred ( RI ) population derived from a cross between a japonica variety , Asominori , with a higher content of ferulic acid , and an indica variety , IR24 , with a lower content , using 289 RFLP markers .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Localization of pms3 , a gene for photoperiod-sensitive genic male sterility , to a 28 . 4-kb DNA fragment .
| | Author: Lu Q Li XH Guo D Xu CG Zhang Q | | Journal: Mol . Genet . Genomics Citation: V : 273 ( 6 ) P : 507-11 Year: 2005 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub15912317 Accession (PMID): 15912317 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: By analyzing recombination events in the sterile individuals using a total of 157 RFLP probes from a BAC contig covering the pms3 region , the pms3 locus was localized to a sub-region of less than 1 . 7 cM .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Methanogen communities in a drained bog : effect of ash fertilization .
| | Author: Galand PE Juottonen H Fritze H YrjlEK .
| | Journal: Microb . Ecol . Citation: V : 49 ( 2 ) P : 209-17 Year: 2005 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub15965727 Accession (PMID): 15965727 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: The methanogen community structure was studied by DNA isolation , PCR amplification of the methyl coenzyme-M reductase ( mcr ) gene , denaturing gradient gel electrophoresis ( DGGE ) , and restriction fragment length polymorphism ( RFLP ) analysis .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Rapid and simple procedure for homogenizing leaf it issues suitable for mini-midi-scale DNA extraction in rice .
| | Author: Yi G Choi JH Lee JH Jeong U Nam MH Yun DW Eun MY .
| | Journal: Prep . Biochem . Biotechnol . Citation: V : 35 ( 3 ) P : 257-61 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub16109637 Accession (PMID): 16109637 | Matching Sentences:
[ Sen. 6, subscore: 1.00 ]: The quality and quantity of DNA was compatible for most of PCR work and RFLP analysis .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Production and characterization of a complete set of individual chromosome additions from Oryza officinalis to Oryza sativa using RFLP and GISH analyses .
| | Author: Tan G Jin H Li G He R Zhu L He G | | Journal: Theor . Appl . Genet . Citation: V : 111 ( 8 ) P : 1585-95 Year: 2005 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub16177899 Accession (PMID): 16177899 | Matching Sentences:
[ Sen. 7, subscore: 1.00 ]: Through RFLP and GISH analyses , 25 MAALs ( 2 n = 25 , AA + 1C ) were identified and divided into 12 syntenic groups , designated MAALs 1-12 .
[ Sen. 10, subscore: 1.00 ]: Comparative RFLP maps showed strong syntenic associations between the A-genomes and C-genomes .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: [ QTLs mapping and genetic analysis of tiller angle in rice ( Oryza sativa L ) ] | | Author: Yu CY Liu YQ Jiang L Wang CM Zhai HQ Wan JM .
| | Journal: Yi Chuan Xue Bao Citation: V : 32 ( 9 ) P : 948-54 Year: 2005 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub16201239 Accession (PMID): 16201239 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: QTL analysis of tiller angle was conducted based on the saturated RFLP marker linkage map and the CSSL graphical genetype .
[ Sen. 8, subscore: 1.00 ]: Meanwhile , an analysis of CSSL graphical genetypes also showed that there was a positive allele on the IR24 chromosome substitution segment delimited by RFLP marker C609 and C506 with approximate 15 cM interval , which proved the existence of qTA-9 .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: [ QTL analysis for traits associated with photosynthetic functions in rice ( Oryza sativa L ) ] | | Author: Hu ML Wang CM Yang QH Zhai HQ Lu W Zhang RX Wan JM .
| | Journal: Yi Chuan Xue Bao Citation: V : 32 ( 8 ) P : 818-24 Year: 2005 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub16231736 Accession (PMID): 16231736 | Matching Sentences:
[ Sen. 6, subscore: 1.00 ]: Interestingly , the QTL controlling chlorophyll content , namely qCC-1 reported here , was detected in the region of the RFLP marker C122 on chromosome 1 , where harbored NADH-glutamate synthase structure gene according to a previous study .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Phylogenetic position of Mesorhizobium huakuii subsp . rengei , a symbiont of Astragalus sinicus cv .
Japan .
| | Author: Nuswantara S Fujie M Yamada T Malek W Inaba M Kaneko Y Murooka Y | | Journal: J Biosci . Bioeng . Citation: V : 87 ( 1 ) P : 49-55 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub16232424 Accession (PMID): 16232424 | Matching Sentences:
[ Sen. 3, subscore: 1.00 ]: The following phylogenetic approaches were used : restriction fragment length polymorphism ( RFLP ) -polymerase chain reaction ( PCR ) analysis of a full-length 16S rDNA fragment , 16S rDNA analysis of the first 300-bp sequence , bacteriophage typing , and amplification of the genomic region by random primer .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress .
| | Author: Rostoks N Mudie S Cardle L Russell J Ramsay L Booth A Svensson JT Wanamaker SI Walia H Rodriguez EM Hedley PE Liu H Morris J Close TJ Marshall DF Waugh R | | Journal: Mol . Genet . Genomics Citation: V : 274 ( 5 ) P : 515-27 Year: 2005 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub16244872 Accession (PMID): 16244872 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: More than 300 SNP loci were mapped genetically in three experimental mapping populations which allowed the construction of an integrated SNP map incorporating a large number of RFLP , AFLP and SSR markers ( 1 , 237 loci in total ) .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: High-resolution mapping and mutation analysis separate the rust resistance genes Sr31 , Lr26 and Yr9 on the short arm of rye chromosome 1 .
| | Author: Mago R Miah H Lawrence GJ Wellings CR Spielmeyer W Bariana HS McIntosh RA Pryor AJ Ellis JG .
| | Journal: Theor . Appl . Genet . Citation: V : 112 ( 1 ) P : 41-50 Year: 2005 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub16283230 Accession (PMID): 16283230 | Matching Sentences:
[ Sen. 9, subscore: 1.00 ]: Multiple RFLP markers , identified using part of the barley Mla powdery mildew resistance gene as probe , co-segregated with Sr31 and Yr9 .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Molecular cloning , expression and mapping analysis of a novel cytosolic ascorbate peroxidase gene from tomato .
| | Author: Zou LP Li HX Ouyang B Zhang JH Ye ZB .
| | Journal: DNA Seq .
Citation: V : 16 ( 6 ) P : 456-61 Year: 2005 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub16287625 Accession (PMID): 16287625 | Matching Sentences:
[ Sen. 6, subscore: 1.00 ]: LecAPX2 was mapped to 6-A using 75 tomato introgression lines ( ILs ) , each containing a single homozygous RFLP-defined chromosome segment from the green-fruited species Lycopersicon pennellii .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Mapping QTLs that control the performance of rice it issue culture and evaluation of derived near-isogenic lines .
| | Author: Taguchi-Shiobara F Yamamoto T Yano M Oka S | | Journal: Theor . Appl . Genet . Citation: V : 112 ( 5 ) P : 968-76 Year: 2006 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub16418858 Accession (PMID): 16418858 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Quantitative trait loci ( QTLs ) that control the performance of it issue culture in rice were detected by using 116 RFLP markers and 183 BC1F3 lines derived from two varieties , Koshihikari and Kasalath .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Genomic analysis and marker development for the Tsn1 locus in wheat using bin-mapped ESTs and flanking BAC contigs .
| | Author: Lu HJ Fellers JP Friesen TL Meinhardt SW Faris JD .
| | Journal: Theor . Appl . Genet . Citation: V : 112 ( 6 ) P : 1132-42 Year: 2006 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub16456656 Accession (PMID): 16456656 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: Twenty-three EST loci were mapped as either PCR-based single-stranded conformational polymorphism or RFLP markers in a low-resolution wheat population .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Candidate genes for barley mutants involved in plant architecture : an in silico approach .
| | Author: Rossini L Vecchietti A Nicoloso L Stein N Franzago S Salamini F Pozzi C | | Journal: Theor . Appl . Genet . Citation: V : 112 ( 6 ) P : 1073-85 Year: 2006 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub16501940 Accession (PMID): 16501940 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: Based on map positions of mutants , sequenced RFLP markers linked to the target loci were selected .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 3.00 |
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| Title: Genetic Diversity among Xanthomonas campestris Strains Pathogenic for Small Grains .
| | Author: Bragard C Verdier V Maraite H | | Journal: Citation: V : 61 ( 3 ) P : 1020-1026 Year: 1995 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub16534952 Accession (PMID): 16534952 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: Corona , indirect immunofluorescence , and restriction fragment length polymorphism ( RFLP ) .
[ Sen. 5, subscore: 1.00 ]: Three probes were used for the RFLP analysis .
[ Sen. 8, subscore: 1.00 ]: Strains of X campestris pv . graminis , X campestris pv . phleipratensis , and X campestris pv . poae are shown to be related but are also distinguishable by RFLP patterns , serology , and pathogenicity on bread wheat .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: High-density mapping and comparative analysis of agronomically important traits on wheat chromosome 3A .
| | Author: Dilbirligi M Erayman M Campbell BT Randhawa HS Baenziger PS Dweikat I Gill KS .
| | Journal: Genomics Citation: V : 88 ( 1 ) P : 74-87 Year: 2006 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub16624516 Accession (PMID): 16624516 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: Polymorphism survey of cultivars Cheyenne ( CNN ) and Wichita ( WI ) , and a substitution line of CNN carrying chromosome 3A from WI [ CNN ( WI3A ) ] , with 142 RFLP probes and 55 SSR markers revealed that the extent of polymorphism is different among various group 3 chromosomal regions as well as among the homoeologs .
[ Sen. 5, subscore: 1.00 ]: A genetic-linkage map for chromosome 3A was developed by mapping 17 QTLs for seven agronomic traits relative to 26 RFLP and 15 SSR chromosome 3A-specific markers on 95 single-chromosome recombinant inbred lines .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: RFLP analysis for mitochondrial genome of CMS-rice .
| | Author: Huang W Wang L Yi P Tan XL Zhang XM Zhang ZJ Li YS Zhu YG .
| | Journal: Yi Chuan Xue Bao Citation: V : 33 ( 4 ) P : 330-8 Year: 2006 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub16625831 Accession (PMID): 16625831 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Restriction fragment length polymorphism ( RFLP ) was used to analyze mitochondrial ( mt ) genome of cytoplasmic male sterility ( CMS ) rice .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 7.00 |
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| Title: Restriction fragment length polymorphism analysis of CCDD genome species of the genus Oryza L | | Author: Jena KK Kochert G | | Journal: Plant Mol . Biol . Citation: V : 16 ( 5 ) P : 831-9 Year: 1991 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub1677594 Accession (PMID): 1677594 | Matching Sentences:
[ Sen. 6, subscore: 2.00 ]: By comparing RFLPs from the allotetraploids with those from a CC genome diploid wild species ( O officinalis ) , it was possible to detect RFLPs specific for both the CC and DD genomes of the allotetraploid .
[ Sen. 1, subscore: 1.00 ]: Restriction fragment length polymorphisms ( RFLPs ) were studied in fourteen accessions of CCDD genome allotetraploid wild rice species ( Oryza latifolia , O alta and O grandiglumis ) .
[ Sen. 2, subscore: 1.00 ]: Fourteen nuclear RFLP markers previously mapped in AA genome-cultivated rice were used as probes .
[ Sen. 3, subscore: 1.00 ]: A phylogenetic tree , constructed by parsimony analysis based on RFLPs , grouped the accessions according to their geographic origin from Central or South America .
[ Sen. 5, subscore: 1.00 ]: Duplicate loci , representing the two constituent genomes of the allotetraploid , were observed for most RFLP markers .
[ Sen. 7, subscore: 1.00 ]: In inter-accession F2 populations , independent segregation of RFLP markers for CC and DD genomes was observed .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Molecular and cytogenetic characterization of an Oryza officinalis-O sativa chromosome 4 addition line and its progenies .
| | Author: Jin H Tan G Brar DS Tang M Li G Zhu L He G | | Journal: Plant Mol . Biol . Citation: V : 62 ( 4-5 ) P : 769-77 Year: 2006 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub16941211 Accession (PMID): 16941211 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: Comparative analysis showed that O sativa and O officinalis shared high synteny of restriction fragment length polymorphism ( RFLP ) markers and low synteny of simple sequence repeat ( SSR ) markers .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 3.00 |
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| Title: Molecular genetic characterization of the Lr34/Yr18 slow rusting resistance gene region in wheat .
| | Author: Lagudah ES McFadden H Singh RP Huerta-Espino J Bariana HS Spielmeyer W | | Journal: Theor . Appl . Genet . Citation: V : 114 ( 1 ) P : 21-30 Year: 2006 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub17008991 Accession (PMID): 17008991 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: Extensive RFLP analysis using the wEST derived clones as probes on a panel of wheat genetic stocks with or without Lr34/Yr18 revealed monomorphic patterns as the norm in this region of the wheat genome .
[ Sen. 6, subscore: 1.00 ]: One exception was a wEST derived clone that produced a consistent RFLP pattern that distinguished the Lr34/Yr18 genetic stocks and well-established cultivars known either to possess or lack Lr34/Yr18 .
[ Sen. 7, subscore: 1.00 ]: Conversion of the RFLP to a codominant sequence tagged site ( csLV34 ) revealed a bi-allelic locus , where a variant size of 79 bp insertion in an intron sequence was associated with lines or cultivars that lacked Lr34/Yr18 .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: A 1 , 000-loci transcript map of the barley genome : new anchoring points for integrative grass genomics .
| | Author: Stein N Prasad M Scholz U Thiel T Zhang H Wolf M Kota R Varshney RK Perovic D Grosse I Graner A | | Journal: Theor . Appl . Genet . Citation: V : 114 ( 5 ) P : 823-39 Year: 2007 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub17219208 Accession (PMID): 17219208 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: An integrated barley transcript map ( consensus map ) comprising 1 , 032 expressed sequence tag ( EST ) -based markers ( total 1 , 055 loci : 607 RFLP , 190 SSR , and 258 SNP ) , and 200 anchor markers from previously published data , has been generated by mapping in three doubled haploid ( DH ) populations .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Molecular cloning and characterization of a novel SNAP25-type protein gene OsSNAP32 in rice ( Oryza sativa L ) .
| | Author: Bao YM Wang JF Huang J Zhang HS | | Journal: Mol Biol Rep Citation: V : 35 P : 145-52 Year: 2008 Type: In-Process | | Literature: oryza Field: abstract Doc ID: pub17380428 Accession (PMID): 17380428 | Matching Sentences:
[ Sen. 3, subscore: 1.00 ]: The OsSNAP32 gene contains five exons and four introns , and is located between RFLP markers C12276S and S1917 on chromosome 2 in rice .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Molecular and pathotypic characterization of new Xanthomonas oryzae strains from West Africa .
| | Author: Gonzalez C Szurek B Manceau C Mathieu T Sere Y Verdier V | | Journal: Mol Plant Microbe Interact Citation: V : 20 P : 534-46 Year: 2007 Type: MEDLINE | | Literature: oryza Field: abstract Doc ID: pub17506331 Accession (PMID): 17506331 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: Restriction fragment length polymorphism ( RFLP ) , repetitive sequence-based polymerase chain reaction , fluorescent amplified fragment-length polymorphism ( FAFLP ) analyses were assessed for molecular characterization , while pathogenicity was tested by leaf clipping and leaf infiltration .
[ Sen. 3, subscore: 1.00 ]: Dendrograms were generated for the data sets obtained from RFLP analysis and repetitive polymerase chain reaction suggesting that the interrelationships between strains were dependent on the technique used .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Predicting the size of the progeny mapping population required to positionally clone a gene .
| | Author: Dinka SJ Campbell MA Demers T Raizada MN | | Journal: Genetics Citation: V : 176 P : 2035-54 Year: 2007 Type: MEDLINE | | Literature: oryza Field: abstract Doc ID: pub17565938 Accession (PMID): 17565938 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: We then used each validated equation to test whether neighborhood meiotic recombination frequencies extracted from a reference RFLP map can help researchers predict the mapping population size .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Expression of the gene for sterol-biosynthesis enzyme squalene epoxidase in parenchyma cells of the oil plant , Euphorbia tirucalli .
| | Author: Uchida H Sugiyama R Nakayachi O Takemura M Ohyama K | | Journal: Planta Citation: V : 226 P : 1109-15 Year: 2007 Type: MEDLINE | | Literature: oryza Field: abstract Doc ID: pub17569082 Accession (PMID): 17569082 | Matching Sentences:
[ Sen. 3, subscore: 1.00 ]: Southern-blot analysis of total DNA using cDNA fragment as a probe showed that the E tirucalli squalene epoxidase gene ( EtSE ) is single-copy type in terms of restriction fragment length polymorphism ( RFLP ) .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Fine mapping and targeted SNP survey using rice-wheat gene colinearity in the region of the Bo1 boron toxicity tolerance locus of bread wheat .
| | Author: Schnurbusch T Collins NC Eastwood RF Sutton T Jefferies SP Langridge P | | Journal: Theor Appl Genet Citation: V : 115 P : 451-61 Year: 2007 Type: MEDLINE | | Literature: oryza Field: abstract Doc ID: pub17571251 Accession (PMID): 17571251 | Matching Sentences:
[ Sen. 6, subscore: 1.00 ]: In contrast , RFLP provided a much greater number of genetic markers , with every tested gene identifying polymorphism .
[ Sen. 8, subscore: 1.00 ]: In total , 28 new RFLP , PCR and SSR markers were added to the existing map .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: High-resolution genetic mapping of bacterial blight resistance gene Xa10 .
| | Author: Gu K Sangha JS Li Y Yin Z | | Journal: Theor Appl Genet Citation: V : 116 P : 155-63 Year: 2008 Type: MEDLINE | | Literature: oryza Field: abstract Doc ID: pub17924090 Accession (PMID): 17924090 | Matching Sentences:
[ Sen. 9, subscore: 1.00 ]: Linkage analysis using existing RFLP markers and F2 mapping population mapped the Xa10 locus to the proximal side of E1981S with genetic distance at 0 . 93 cM .
[ Sen. 10, subscore: 1.00 ]: With five new RFLP markers developed from the genomic sequence of Nipponbare , Xa10 was finely mapped at genetic distance of 0 . 28 cM between proximal marker M491 and distal marker M419 and co-segregated with markers S723 and M604 .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 4.00 |
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| Title: Avirulence gene and insertion element-based RFLP as well as RAPD markers reveal high levels of genomic polymorphism in the rice pathogen Xanthomonas oryzae pv . oryzae .
| | Author: Hu J Zhang Y Qian W He C | | Journal: Syst Appl Microbiol Citation: V : 30 P : 587-600 Year: 2007 Type: MEDLINE | | Literature: oryza Field: abstract Doc ID: pub17959329 Accession (PMID): 17959329 | Matching Sentences:
[ Sen. 2, subscore: 2.00 ]: To investigate the level of genetic variation in Xanthomonas oryzae pv . oryzae ( Xoo ) , the causative agent of rice bacterial blight disease , three DNA marker systems , including ( i ) restriction fragment length polymorphism ( RFLP ) of the avrBs3/PthA family genes ( avrXa27 ) , ( ii ) RFLP of insertion ( IS ) elements and ( iii ) random amplified polymorphic DNA ( RAPD ) markers , were used to detect polymorphism among 32 Xoo strains that differed in their virulence patterns .
[ Sen. 4, subscore: 1.00 ]: RFLP of six IS elements revealed that these mobile sequences were abundant in Xoo genomes , with 150 of the total of 165 discernable markers being variable .
[ Sen. 6, subscore: 1.00 ]: In addition , analysis of molecular variance ( AMOVA ) of data from RFLP analysis of IS elements and from RAPD analysis showed that most of the genetic variation residues were within Xoo populations , rather than between populations .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Fine mapping of a major quantitative trait loci , qSSP7 , controlling the number of spikelets per panicle as a single Mendelian factor in rice .
| | Author: Xing YZ Tang WJ Xue WY Xu CG Zhang Q | | Journal: Theor Appl Genet Citation: V : 116 P : 789-96 Year: 2008 Type: MEDLINE | | Literature: oryza Field: abstract Doc ID: pub18219477 Accession (PMID): 18219477 | Matching Sentences:
[ Sen. 3, subscore: 1.00 ]: In a BC ( 2 ) F ( 2 ) population consisting of 190 plants , the frequency distribution of SPP was shown to be discontinuous and followed the expected Mendelian ratios ( 1 : 2 : 1 by progeny test ) for single locus segregation . qSPP7 was mapped to a 0 . 4 cM region between SSR marker RM3859 and RFLP marker C39 based on tests of the BC ( 2 ) F ( 2 ) population and its progeny .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Analysis of non-TIR NBS-LRR resistance gene analogs in Musa acuminata Colla : isolation , RFLP marker development , and physical mapping .
| | Author: Miller RN Bertioli DJ Baurens FC Santos CM Alves PC Martins NF Togawa RC Souza MT Jr Pappas GJ Jr | | Journal: BMC Plant Biol Citation: V : 8 P : 15 Year: 2008 Type: MEDLINE | | Literature: oryza Field: abstract Doc ID: pub18234103 Accession (PMID): 18234103 | Matching Sentences:
[ Sen. 11, subscore: 1.00 ]: RFLP-RGA markers were developed , with 12 displaying distinct polymorphisms in parentals and F1 progeny of a diploid M acuminata mapping population .
[ Sen. 17, subscore: 1.00 ]: The developed RFLP-RGA markers are applicable for genetic map development and marker assisted selection for defined traits such as pest and disease resistance .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 9.00 |
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| Title: Distinct regulatory role for RFL , the rice LFY homolog , in determining flowering time and plant architecture .
| | Author: Rao NN Prasad K Kumar PR Vijayraghavan U | | Journal: Proc Natl Acad Sci U S A Citation: V : 105 P : 3646-51 Year: 2008 Type: MEDLINE | | Literature: oryza Field: abstract Doc ID: pub18305171 Accession (PMID): 18305171 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: In Arabidopsis thaliana , a model eudicot species , the transcription factor LFY confers a floral fate to new meristems arising from the periphery of the reproductive shoot apex Diverse orthologous LFY genes regulate vegetative-to-reproductive phase transition when expressed in Arabidopsis , a property not shared by RFL , the homolog in the agronomically important grass , rice .
[ Sen. 3, subscore: 1.00 ]: We have characterized RFL by knockdown of its expression and by its ectopic overexpression in transgenic rice .
[ Sen. 4, subscore: 1.00 ]: We find that reduction in RFL expression causes a dramatic delay in transition to flowering , with the extreme phenotype being no flowering .
[ Sen. 5, subscore: 1.00 ]: Conversely , RFL overexpression triggers precocious flowering .
[ Sen. 6, subscore: 1.00 ]: In these transgenics , the expression levels of known flowering time genes reveal RFL as a regulator of OsSOC1 ( OsMADS50 ) , an activator of flowering .
[ Sen. 7, subscore: 1.00 ]: Aside from facilitating a transition of the main growth axis to an inflorescence meristem , RFL expression status affects vegetative axillary meristems and therefore regulates tillering .
[ Sen. 8, subscore: 1.00 ]: The unique spatially and temporally regulated RFL expression during the development of vegetative axillary bud ( tiller ) primordia and inflorescence branch primordia is therefore required to produce tillers and panicle branches , respectively .
[ Sen. 9, subscore: 1.00 ]: Our data provide mechanistic insights into a unique role for RFL in determining the typical rice plant architecture by regulating distinct downstream pathways .
[ Sen. 10, subscore: 1.00 ]: These results offer a means to alter rice flowering time and plant architecture by manipulating RFL-mediated pathways .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Molecular identification of yeast species associated with Hamei--a traditional starter used for rice wine production in Manipur , India .
| | Author: Jeyaram K Singh WM Capece A Romano P | | Journal: Int J Food Microbiol Citation: V : 124 P : 115-25 Year: 2008 Type: MEDLINE | | Literature: oryza Field: abstract Doc ID: pub18433905 Accession (PMID): 18433905 | Matching Sentences:
[ Sen. 14, subscore: 1.00 ]: Finally using mitochondrial DNA restriction analysis ( mt-DNA RFLP ) , S cerevisiae strains belonging to the major karyotype K1 were distinctly differentiated with highly polymorphic bands by Hinf I and Hae III endonucleases .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Development of genic-microsatellite markers for sorghum staygreen QTL using a comparative genomic approach with rice .
| | Author: Srinivas G Satish K Murali Mohan S Nagaraja Reddy R Madhusudhana R Balakrishna D Venkatesh Bhat B Howarth CJ Seetharama N | | Journal: Theor Appl Genet Citation: V : 117 P : 283-96 Year: 2008 Type: In-Data-Review | | Literature: oryza Field: abstract Doc ID: pub18438637 Accession (PMID): 18438637 | Matching Sentences:
[ Sen. 3, subscore: 1.00 ]: For each of the sorghum QTL regions , the reported RFLP markers were compiled , used for sequence similarity searches against the rice genome which identified syntenous regions on rice chromosome 1 for Stg1 and Stg2 QTL , on chromosome 9 for Stg3 QTL , and on chromosome 11 for Stg4 QTL .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Comparative analysis of multiple disease resistance in ryegrass and cereal crops .
| | Author: Jo YK Barker R Pfender W Warnke S Sim SC Jung G | | Journal: Theor Appl Genet Citation: V : 117 P : 531-43 Year: 2008 Type: In-Data-Review | | Literature: oryza Field: abstract Doc ID: pub18521564 Accession (PMID): 18521564 | Matching Sentences:
[ Sen. 6, subscore: 1.00 ]: However , at the genome-wide comparison based on 72 common RFLP markers between ryegrass and cereals , coincidence of QTLs for disease resistance to similar fungal pathogens was not statistically significant .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Deletion in a gene associated with grain size increased yields during rice domestication .
| | Author: Shomura A Izawa T Ebana K Ebitani T Kanegae H Konishi S Yano M | | Journal: Nat Genet Citation: V : 40 P : 1023-8 Year: 2008 Type: In-Process | | Literature: oryza Field: abstract Doc ID: pub18604208 Accession (PMID): 18604208 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: In addition , we mapped two other defective functional nucleotide polymorphisms of rice domestication-related genes with genome-wide RFLP polymorphisms of various rice landraces .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Inference of the japonica rice domestication process from the distribution of six functional nucleotide polymorphisms of domestication-related genes in various landraces and modern cultivars .
| | Author: Konishi S Ebana K Izawa T | | Journal: Plant Cell Physiol Citation: V : 49 P : 1283-93 Year: 2008 Type: MEDLINE | | Literature: oryza Field: abstract Doc ID: pub18701522 Accession (PMID): 18701522 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: These polymorphisms were assigned by using genome-wide patterns of restriction fragment length polymorphisms ( RFLPs ) and the local origins of the landraces .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Comparison of QTLs for rice seedling morphology under different water supply conditions .
| | Author: Zheng B Yang L Mao C Huang Y Wu P | | Journal: J Genet Genomics Citation: V : 35 P : 473-84 Year: 2008 Type: In-Process | | Literature: oryza Field: abstract Doc ID: pub18721784 Accession (PMID): 18721784 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: Ninetysix doubled-haploid ( DH ) rice lines of an indica and japonica cross were grown in both flooding and upland conditions and QTLs for morphological traits at seedling stage were examined using 208 restriction fragment length polymorphism ( RFLP ) and 76 microsatellite ( SSR ) markers .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Mutation in acetylcholinesterase1 associated with triazophos resistance in rice stem borer , Chilo suppressalis ( Lepidoptera : Pyralidae ) .
| | Author: Jiang X Qu M Denholm I Fang J Jiang W Han Z | | Journal: Biochem Biophys Res Commun Citation: V : 378 P : 269-72 Year: 2009 Type: MEDLINE | | Literature: oryza Field: abstract Doc ID: pub19028456 Accession (PMID): 19028456 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: An assay based on restriction fragment length polymorphism ( RFLP ) analysis was developed to diagnose A314S genotypes in field populations .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Molecular changes in protoplast-derived rice plants .
| | Author: Brown PT Kyozuka J Sukekiyo Y Kimura Y Shimamoto K Lrz H | | Journal: Mol . Gen . Genet . Citation: V : 223 ( 2 ) P : 324-8 Year: 1990 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub1979143 Accession (PMID): 1979143 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: To determine whether regeneration of rice plants from protoplast culture induces DNA polymorphisms , progeny plants from direct regenerants of such cultures were examined for restriction fragment length polymorphisms ( RFLP analysis ) .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Fine-scale comparative genetic and physical mapping supports map-based cloning strategies for the self-incompatibility loci of perennial ryegrass ( Lolium perenne L ) .
| | Author: Shinozuka H Cogan NO Smith KF Spangenberg GC Forster JW | | Journal: Plant Mol Biol Citation: V : 72 P : 343-55 Year: 2010 Type: MEDLINE | | Literature: oryza Field: abstract Doc ID: pub19943086 Accession (PMID): 19943086 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: SI gene-linked genetic markers based on heterologous cDNA restriction fragment length polymorphisms ( RFLPs ) and homologous genomic DNA-derived simple sequence repeats ( SSRs ) were converted to single nucleotide polymorphism ( SNP ) format for efficient genotyping .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 3.00 |
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| Title: Correlation exploration of metabolic and genomic diversity in rice .
| | Author: Mochida K Furuta T Ebana K Shinozaki K Kikuchi J | | Journal: BMC Genomics Citation: V : 10 P : 568 Year: 2009 Type: In-Process | | Literature: oryza Field: abstract Doc ID: pub19948071 Accession (PMID): 19948071 | Matching Sentences:
[ Sen. 7, subscore: 1.00 ]: To determine the genomic diversity of the rice genome , we genotyped 128 restriction fragment length polymorphism ( RFLP ) markers to calculate the genetic distance among the accessions .
[ Sen. 9, subscore: 1.00 ]: We found no correlation between global metabolic diversity and the phylogenetic relationships among the rice accessions ( r ( s ) = 0 . 14 ) by analyzing the distance matrices ( calculated from the pattern of the metabolic fingerprint in the 4 . 29 to 0 . 71-ppm ( 1 ) H chemical shift ) and the genetic distance on the basis of the RFLP markers .
[ Sen. 10, subscore: 1.00 ]: However , local correlation analysis between the distance matrices ( derived from each 0 . 04-ppm integral region of the ( 1 ) H chemical shift ) against genetic distance matrices ( derived from sets of 3 adjacent markers along each chromosome ) , generated clear correlations ( r ( s ) > 0 . 4 , p < 0 . 001 ) at 34 RFLP markers .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: An unedited 1 . 1 kb mitochondrial orfB gene transcript in the wild abortive cytoplasmic male sterility ( WA-CMS ) system of Oryza sativa L subsp . indica .
| | Author: Das S Sen S Chakraborty A Chakraborti P Maiti MK Basu A Basu D Sen SK | | Journal: BMC Plant Biol Citation: V : 10 P : 39 Year: 2010 Type: MEDLINE | | Literature: oryza Field: abstract Doc ID: pub20193092 Accession (PMID): 20193092 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: RESULTS : RFLPs were detected for atp6 and orfB genes in sterile and fertile rice lines , with one copy of each in the mt-genome .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Rice TOGO Browser : A platform to retrieve integrated information on rice functional and applied genomics .
| | Author: Nagamura Y Antonio BA Sato Y Miyao A Namiki N Yonemaru J Minami H Kamatsuki K Shimura K Shimizu Y Hirochika H | | Journal: Plant Cell Physiol Citation: V : 52 P : 230-7 Year: 2011 Type: MEDLINE | | Literature: oryza Field: abstract Doc ID: pub21216747 Accession (PMID): 21216747 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: The Rice TOGO Browser is an online public resource designed to facilitate integration and visualization of mapping data of bacterial artificial chromosome ( BAC ) /P1-derived artificial chromosome ( PAC ) clones , genes , restriction fragment length polymorphism ( RFLP ) /simple sequence repeat ( SSR ) markers and phenotype data represented as quantitative trait loci ( QTLs ) onto the genome sequence , and to provide a platform for more efficient utilization of genome information from the point of view of applied genomics as well as functional genomics .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Gains in QTL detection using an ultra-high density SNP map based on population sequencing relative to traditional RFLP/SSR markers .
| | Author: Yu H Xie W Wang J Xing Y Xu C Li X Xiao J Zhang Q | | Journal: PLoS One Citation: V : 6 P : e17595 Year: 2011 Type: MEDLINE | | Literature: oryza Field: abstract Doc ID: pub21390234 Accession (PMID): 21390234 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: However , almost all the studies were based on linkage maps constructed using low-throughput molecular markers , eg restriction fragment length polymorphisms ( RFLPs ) and simple sequence repeats ( SSRs ) , thus are mostly of low density and not able to provide precise and complete information about the numbers and locations of the genes or QTLs controlling the traits .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: A molecular map of the apomixis-control locus in Paspalum procurrens and its comparative analysis with other species of Paspalum .
| | Author: Hojsgaard DH Martinez EJ Acuna CA Quarin CL Pupilli F | | Journal: Theor Appl Genet Citation: V : 123 P : 959-71 Year: 2011 Type: In-Process | | Literature: oryza Field: abstract Doc ID: pub21713535 Accession (PMID): 21713535 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: On this progeny , a set of heterologous rice RFLP markers strictly co-segregating in coupling phase with apomixis was identified .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: ABERRANT PANICLE ORGANIZATION 2/RFL , the rice ortholog of Arabidopsis LEAFY , suppresses the transition from inflorescence meristem to floral meristem through interaction with APO1 .
| | Author: Ikeda-Kawakatsu K Maekawa M Izawa T Itoh J Nagato Y | | Journal: Plant J Citation: V : 69 P : 168-80 Year: 2012 Type: In-Data-Review | | Literature: oryza Field: abstract Doc ID: pub21910771 Accession (PMID): 21910771 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: Map-based cloning revealed that APO2 is identical to previously reported RFL gene , the rice ortholog of the Arabidopsis LEAFY ( LFY ) gene .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Identification and comparative mapping of a powdery mildew resistance gene derived from wild emmer ( Triticum turgidum var . dicoccoides ) on chromosome 2BS .
| | Author: Liu Z Zhu J Cui Y Liang Y Wu H Song W Liu Q Yang T Sun Q Liu Z | | Journal: Theor Appl Genet Citation: V : 124 P : 1041-9 Year: 2012 Type: MEDLINE | | Literature: oryza Field: abstract Doc ID: pub22170431 Accession (PMID): 22170431 | Matching Sentences:
[ Sen. 6, subscore: 1.00 ]: MlIW170 co-segregated with Xcau516 , an STS marker developed from RFLP marker Xwg516 that co-segregated with powdery mildew resistance gene Pm26 on 2BS .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Community structure of methanogenic archaea and methane production associated with compost-treated tropical rice-field soil .
| | Author: Singh A Singh RS Upadhyay SN Joshi CG Tripathi AK Dubey SK | | Journal: FEMS Microbiol Ecol Citation: V : P : Year: 2012 Type: Publisher | | Literature: oryza Field: abstract Doc ID: pub22587395 Accession (PMID): 22587395 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: The RFLP-based 16S rRNA gene-targeted phylogenetic analysis showed that clones were closely related to diverse group of methanogens comprising members of Methanomicrobiaceae , Methanosarcinaceae , Methanosaetaceae and RC I Laboratory incubation studies revealed higher amount of cumulative CH ( 4 ) at the flowering stage .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Phylogenetic analysis identifies Candidatus Phytoplasma oryzae-related strain associated with Yellow Leaf Disease of Areca palm ( Areca catechu L ) in India .
| | Author: Ramaswamy M Nair S Soumya VP Thomas GV | | Journal: Int J Syst Evol Microbiol Citation: V : P : Year: 2012 Type: Publisher | | Literature: oryza Field: abstract Doc ID: pub22843718 Accession (PMID): 22843718 | Matching Sentences:
[ Sen. 10, subscore: 1.00 ]: The virtual RFLP analysis of 1 . 2 Kb fragment of 16S rDNA ( F2nR2 region ) identified the arecanut YLD phytoplasma as a member of 16SrXI-B sub group .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Genetic and physical mapping of telomeres in the rice blast fungus , Magnaporthe grisea .
| | Author: Farman ML Leong SA .
| | Journal: Genetics Citation: V : 140 ( 2 ) P : 479-92 Year: 1995 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub7498730 Accession (PMID): 7498730 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Telomeric restriction fragments were genetically mapped to a previously described linkage map of Magnaporthe grisea , using RFLPs identified by a synthetic probe .
[ Sen. 5, subscore: 1.00 ]: TWelve of the 14 telomeres were found to be genetically linked to existing RFLP markers .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Dominance is the major genetic basis of heterosis in rice as revealed by QTL analysis using molecular markers .
| | Author: Xiao J Li J Yuan L Tanksley SD .
| | Journal: Genetics Citation: V : 140 ( 2 ) P : 745-54 Year: 1995 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub7498751 Accession (PMID): 7498751 | Matching Sentences:
[ Sen. 3, subscore: 1.00 ]: A total of 37 significant QTLs ( LOD > or = 2 . 0 ) was detected through 141 RFLP markers in the BC1F7 populations .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Comparative mapping in grasses .
Oat relationships .
| | Author: Van Deynze AE Nelson JC ODonoughue LS Ahn SN Siripoonwiwat W Harrington SE Yglesias ES Braga DP McCouch SR Sorrells ME .
| | Journal: Mol . Gen . Genet . Citation: V : 249 ( 3 ) P : 349-56 Year: 1995 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub7500960 Accession (PMID): 7500960 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: The development of RFLP linkage maps in hexaploid and diploid oat allows us to study genetic relationships of these species at the DNA level .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Determination of RAPD markers in rice and their conversion into sequence tagged sites ( STSs ) and STS-specific primers .
| | Author: Monna L Miyao A Inoue T Fukuoka S Yamazaki M Zhong HS Sasaki T Minobe Y | | Journal: DNA Res .
Citation: V : 1 ( 3 ) P : 139-48 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub7584040 Accession (PMID): 7584040 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: The loci of the RAPD markers were determined onto the framework of our RFLP linkage map and some of these markers were mapped to regions with few markers .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Host species-specific repetitive DNA sequence in the genome of Magnaporthe grisea , the rice blast fungus .
| | Author: Sone T Suto M Tomita F | | Journal: Biosci . Biotechnol . Biochem . Citation: V : 57 ( 7 ) P : 1228-30 Year: 1993 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub7765312 Accession (PMID): 7765312 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: We cloned a repetitive sequence to show RFLPs in the genome of Magnaporthe grisea , a fungal pathogen responsible for rice blast As the sequence was 0 . 8 kb in length and dispersed in the genome , it was named MGSR1 ( for Magnaporthe grisea short repeat 1 ) .
[ Sen. 3, subscore: 1.00 ]: And the RFLPs , displayed with the sequence , could distinguish between clonal lineages in rice-pathogenic isolates .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: cDNA sequences of three kinds of beta-tubulins from rice .
| | Author: Koga-Ban Y Niki T Nagamura Y Sasaki T Minobe Y | | Journal: DNA Res .
Citation: V : 2 ( 1 ) P : 21-6 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub7788525 Accession (PMID): 7788525 | Matching Sentences:
[ Sen. 3, subscore: 1.00 ]: Using RFLP mapping , these three beta-tubulin cDNAs were mapped to different chromosomes indicating at least three loci for the beta-tubulin gene .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Saturated molecular map of the rice genome based on an interspecific backcross population .
| | Author: Causse MA Fulton TM Cho YG Ahn SN Chunwongse J Wu K Xiao J Yu Z Ronald PC Harrington SE .
| | Journal: Genetics Citation: V : 138 ( 4 ) P : 1251-74 Year: 1994 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub7896104 Accession (PMID): 7896104 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: A molecular map has been constructed for the rice genome comprised of 726 markers ( mainly restriction fragment length polymorphisms ; RFLPs ) .
[ Sen. 4, subscore: 1.00 ]: A subset of the probes used in this study was previously used to construct an RFLP map derived from an inter subspecific cross , providing a basis for comparison of the two maps and of the relative mapping efficiencies in the two crosses .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: RFLP mapping of the maize dzr1 locus , which regulates methionine-rich 10 kDa zein accumulation .
| | Author: Chaudhuri S Messing J | | Journal: Mol . Gen . Genet . Citation: V : 246 ( 6 ) P : 707-15 Year: 1995 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub7898438 Accession (PMID): 7898438 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: Restriction fragment length polymorphism ( RFLP ) mapping of dzr1 was conducted using additional maize DNA markers and orthologous rice DNA markers .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Sequence variation , differential expression and chromosomal location of rice chitinase genes .
| | Author: Nishizawa Y Kishimoto N Saito A Hibi T | | Journal: Mol . Gen . Genet . Citation: V : 241 ( 1-2 ) P : 1-10 Year: 1993 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub7901749 Accession (PMID): 7901749 | Matching Sentences:
[ Sen. 8, subscore: 1.00 ]: By restriction fragment length polymorphism ( RFLP ) linkage analysis , Cht-1 and Cht-3 were mapped onto chromosome 6 and shown to be closely linked ( 0 . 8 cM ) .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Abundance , polymorphism and genetic mapping of microsatellites in rice .
| | Author: Wu KS Tanksley SD .
| | Journal: Mol . Gen . Genet . Citation: V : 241 ( 1-2 ) P : 225-35 Year: 1993 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub7901751 Accession (PMID): 7901751 | Matching Sentences:
[ Sen. 7, subscore: 1.00 ]: Heterozygosity values of all the microsatellite markers were significantly higher than those of RFLP markers , based upon a parallel comparison .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: [ Molecular study on null allolic RFLPs among rice varieties ] | | Author: Mao L Zhu L | | Journal: Yi Chuan Xue Bao Citation: V : 20 ( 4 ) P : 324-33 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub7902724 Accession (PMID): 7902724 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: In RFLP analysis , null allele means that one probe can hybridize to plant DNA from one variety readily , but very faintly to DNA from another variety or even has no hybridization signal under experimental stringency and this may be an indication of deletion , insertion or major sequence rearrangement ( s ) in the corresponding regions .
[ Sen. 3, subscore: 1.00 ]: We report here about null alleles of RFLP among 52 rice varieties uncovered with rice random genomic probe RG684 .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Homoeologous relationships of rice , wheat and maize chromosomes .
| | Author: Ahn S Anderson JA Sorrells ME Tanksley SD .
| | Journal: Mol . Gen . Genet . Citation: V : 241 ( 5-6 ) P : 483-90 Year: 1993 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub7903411 Accession (PMID): 7903411 | Matching Sentences:
[ Sen. 7, subscore: 1.00 ]: Comparative maps for rice , wheat and maize should make it possible to begin uniting the genetics of these species and allow for transfer of mapping information ( including centromere positions ) and molecular marker resources ( eg RFLP probes ) between species .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 3.00 |
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| Title: Molecular phylogeny based on RFLP and its relation with alkaloid patterns in Lupinus plants .
| | Author: Yamazaki M Sato A Saito K Murakoshi I | | Journal: Biol . Pharm . Bull . Citation: V : 16 ( 11 ) P : 1182-4 Year: 1993 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub7906176 Accession (PMID): 7906176 | Matching Sentences:
[ Sen. 4, subscore: 2.00 ]: The phylogenic tree constructed from RFLP profiles was related with the pattern of alkaloid production , indicating the usefulness of RFLP for DNA characterization of medicinal plants .
[ Sen. 1, subscore: 1.00 ]: The restriction fragment length polymorphisms ( RFLPs ) in genomic DNA were detected among six species of Lupinus plants using rice DNA coding for ribosomal RNA ( rDNA ) as a probe .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: RFLP mapping of genes conferring complete and partial resistance to blast in a durably resistant rice cultivar .
| | Author: Wang GL Mackill DJ Bonman JM McCouch SR Champoux MC Nelson RJ .
| | Journal: Genetics Citation: V : 136 ( 4 ) P : 1421-34 Year: 1994 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub7912216 Accession (PMID): 7912216 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: The population was evaluated for blast resistance in the greenhouse and the field , and was analyzed with 127 restriction fragment length polymorphism ( RFLP ) markers .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 3.00 |
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| Title: Comparative RFLP mapping of a wild rice , Oryza officinalis , and cultivated rice , O sativa .
| | Author: Jena KK Khush GS Kochert G | | Journal: Genome Citation: V : 37 ( 3 ) P : 382-9 Year: 1994 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub7913453 Accession (PMID): 7913453 | Matching Sentences:
[ Sen. 1, subscore: 2.00 ]: A comparative RFLP map was constructed in a wild rice , Oryza officinalis , by using 139 genomic and cDNA probes that had been used previously to map RFLPs in O sativa .
[ Sen. 4, subscore: 1.00 ]: Fourteen translocated RFLP markers were found , and chromosome 11 contained a high frequency of such translocated segments .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 3.00 |
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| Title: Comparative RFLP mapping of an allotetraploid wild rice species ( Oryza latifolia ) and cultivated rice ( O sativa ) .
| | Author: Huang H Kochert G | | Journal: Plant Mol . Biol . Citation: V : 25 ( 4 ) P : 633-48 Year: 1994 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub7914758 Accession (PMID): 7914758 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: The purpose of this study was to construct a comparative RFLP map of an allotetraploid wild rice species , Oryza latifolia , and to study the relationship between the CCDD genome of O latifolia and the AA genome of O sativa .
[ Sen. 2, subscore: 1.00 ]: A set of RFLP markers , which had been previously mapped to the AA genome of cultivated rice , were used to construct the comparative map .
[ Sen. 4, subscore: 1.00 ]: The comparative RFLP map contains 149 DNA markers , including 145 genomic DNA markers from cultivated rice , 3 cDNA markers from oat , and one known gene ( waxy , from maize ) .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 4.00 |
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| Title: Genetic and physical mapping of telomeres and macrosatellites of rice .
| | Author: Wu KS Tanksley SD .
| | Journal: Plant Mol . Biol . Citation: V : 22 ( 5 ) P : 861-72 Year: 1993 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub8102907 Accession (PMID): 8102907 | Matching Sentences:
[ Sen. 9, subscore: 2.00 ]: The physical distance from telomeric sequences to a distal RFLP marker , r45s gene , on chromosome 9 , is 200 kb while the distance from telomeric sequences to RG98 , a terminal RFLP marker on chromosome 11 , is 260 kb .
[ Sen. 6, subscore: 1.00 ]: Three such telomeric bands have been mapped to the distal ends of RFLP linkage groups : Telsm-1 on chromosome 8 , Telsa-1 on chromosome 9 and Telsm-3 on chromosome 11 .
[ Sen. 8, subscore: 1.00 ]: Telomeric fragments were shown not only to be genetically linked to but also physically linked ( based on PFGE ) to the terminal RFLP markers .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Restriction fragment length polymorphisms ( RFLPs ) of medicinal plants and crude drugs .
I RFLP probes allow clear identification of Duboisia interspecific hybrid genotypes in both fresh and dried it issues .
| | Author: Mizukami H Ohbayashi K Kitamura Y Ikenaga T | | Journal: Biol . Pharm . Bull . Citation: V : 16 ( 4 ) P : 388-90 Year: 1993 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub8102923 Accession (PMID): 8102923 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: A simple and efficient method for identification of Duboisia leichhardtii F Muell , D myoporoides R BR . and their interspecific hybrid was established by analyzing restriction fragment length polymorphism ( RFLP ) profiles using non-radioactive rice ribosomal DNA as a probe .
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Score: 2.00 |
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| Title: Restriction fragment length polymorphisms of medicinal plants and crude drugs .
II .
Analysis of Glehnia littoralis of different geographical origin .
| | Author: Mizukami H Ohbayashi K Umetsu K Hiraoka N | | Journal: Biol . Pharm . Bull . Citation: V : 16 ( 6 ) P : 611-2 Year: 1993 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub8103396 Accession (PMID): 8103396 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: Hybridization of digoxigenin-labeled probe containing rice ribosomal DNA to the digested DNA showed no difference in the restriction fragment length polymorphism ( RFLP ) profiles among the plants of different geographical origin .
[ Sen. 3, subscore: 1.00 ]: It is concluded that genetic diversity among the geographical strains of G littoralis is so narrow as to be incapable of detecting RFLPs using rDNA as a probe .
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Score: 1.00 |
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| Title: Bupleurum falcatum L in northern Kyushu and Yamaguchi Prefecture are genetically distinguished from other populations , based on DNA fingerprints .
| | Author: Mizukami H Ohbayashi K Ohashi H | | Journal: Biol . Pharm . Bull . Citation: V : 16 ( 7 ) P : 729-31 Year: 1993 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub8104624 Accession (PMID): 8104624 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: The resulting DNA fingerprints allowed us to distinguish the geographic populations of B falcatum when the DNA was digested with Dra I , Kpn I or Taq I A dendrogram based on the RFLP profiles indicated that B falcatum distributing in northern Kyushu and Yamaguchi Prefecture is classified into a taxon or subtaxon that can be differentiated from the plants grown in other regions .
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Score: 3.00 |
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| Title: PFGE analysis of the rice genome : estimation of fragment sizes , organization of repetitive sequences and relationships between genetic and physical distances .
| | Author: Wu KS Tanksley SD .
| | Journal: Plant Mol . Biol . Citation: V : 23 ( 2 ) P : 243-54 Year: 1993 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub8106011 Accession (PMID): 8106011 | Matching Sentences:
[ Sen. 8, subscore: 2.00 ]: Analysis of a cluster of RFLP markers on chromosome 3 revealed that genetically clustered RFLP markers are also physically closely linked , suggesting that clustering of genetic markers may result in part from uneven distribution of single-copy sequences .
[ Sen. 2, subscore: 1.00 ]: Probing 56 RFLP probes selected from the 12 rice chromosomes to PFGE blots of nine rare-cutting restriction enzymes revealed that there are relatively high numbers of rare-cutting restriction sites in the rice genome .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Phylogenetic distribution and genetic mapping of a ( GGC ) n microsatellite from rice ( Oryza sativa L ) .
| | Author: Zhao X Kochert G | | Journal: Plant Mol . Biol . Citation: V : 21 ( 4 ) P : 607-14 Year: 1993 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub8448360 Accession (PMID): 8448360 | Matching Sentences:
[ Sen. 5, subscore: 2.00 ]: By scoring a backcross mapping population , we were able to demonstrate that this locus is stably inherited and does not link to any known RFLP markers on the rice RFLP map .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Polymorphic distribution and molecular diversification of mitochondrial plasmid-like DNAs in the genus Oryza .
| | Author: Miyata S Kanazawa A Tsutsumi N Sano Y Hirai A | | Journal: Jpn .
J Genet .
Citation: V : 70 ( 5 ) P : 601-14 Year: 1995 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub8527166 Accession (PMID): 8527166 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: We amplified the plasmid-like DNAs from strains with the AA genome by PCR and examined restriction fragments length polymorphisms ( RFLPs ) .
[ Sen. 6, subscore: 1.00 ]: RFLPs were detected among families of plasmid-like DNA amplified from different strains .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Screening of RAPD markers linked to the photoperiod-sensitivity gene in rice chromosome 6 using bulked segregant analysis .
| | Author: Monna L Miyao A Zhong HS Sasaki T Minobe Y | | Journal: DNA Res .
Citation: V : 2 ( 3 ) P : 101-6 Year: 1995 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub8581735 Accession (PMID): 8581735 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: Kasalath ) were constructed according to the genotypes of three restriction fragment length polymorphism ( RFLP ) markers located at both ends and the middle of the targeted interval Then another pair of pools were constructed based on the "graphical genotype , " which was made with our high density linkage map .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Rearrangements at a DNA-fingerprint locus in the rice blast fungus .
| | Author: Shull V Hamer JE .
| | Journal: Curr . Genet . Citation: V : 30 ( 3 ) P : 263-71 Year: 1996 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub8753657 Accession (PMID): 8753657 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Populations of the rice blast fungus , Magnaporthe grisea , can be sorted into clonal lineages based on restriction fragment length polymorphisms ( RFLPs ) detected with the repetitive DNA sequence MGR586 .
[ Sen. 3, subscore: 1.00 ]: In the process of analyzing the meiotic segregation of MGR586 RFLPs we identified a novel polymorphism , called MGR586-P2 , in one member of a sister-spore pair from a complete tetrad .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Isolation and characterization of cDNAs encoding vacuolar H ( + ) -pyrophosphatase isoforms from rice ( Oryza sativa L ) .
| | Author: Sakakibara Y Kobayashi H Kasamo K | | Journal: Plant Mol . Biol . Citation: V : 31 ( 5 ) P : 1029-38 Year: 1996 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub8843945 Accession (PMID): 8843945 | Matching Sentences:
[ Sen. 6, subscore: 1.00 ]: Chromosomal mapping by RFLP techniques demonstrates that OVP1 and OVP2 are isoforms encoded by different genes .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 3.00 |
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| Title: Restriction fragment length polymorphisms of rDNA and variation of essential oil composition in Atractylodes plants .
| | Author: Mizukami H Shimizu R Kohda H Kohjyouma M Kawanishi F Hiraoka N | | Journal: Biol . Pharm . Bull . Citation: V : 19 ( 4 ) P : 577-80 Year: 1996 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub8860962 Accession (PMID): 8860962 | Matching Sentences:
[ Sen. 2, subscore: 2.00 ]: The resulting restriction fragment length polymorphism ( RFLP ) profiles allowed us to distinguish the three Atractylodes species when DNA was digested with Sac I Although atractylon was detected in the rhizomes of some of the cultivated strains of A lancea , their RFLP profiles clearly indicate that these plants are not hybrids of A ovata or A japonica .
[ Sen. 3, subscore: 1.00 ]: RFLP analysis also revealed the presence of intraspecific variation in DNA sequence of rRNA locus among A lancea as well as A japonica .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Level of polymorphism and genetic mapping of AFLP markers in rice .
| | Author: Mackill DJ Zhang Z Redoa ED Colowit PM .
| | Journal: Genome Citation: V : 39 ( 5 ) P : 969-77 Year: 1996 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub8890522 Accession (PMID): 8890522 | Matching Sentences:
[ Sen. 10, subscore: 1.00 ]: Seven AFLP primer combinations were assayed on 80 F2 plants of an indica x japonica cross previously mapped with RFLP markers .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Development of microsatellite markers and characterization of simple sequence length polymorphism ( SSLP ) in rice ( Oryza sativa L ) .
| | Author: Panaud O Chen X McCouch SR .
| | Journal: Mol . Gen . Genet . Citation: V : 252 ( 5 ) P : 597-607 Year: 1996 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub8914521 Accession (PMID): 8914521 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: Our objective is to augment the existing RFLP map of rice with simple sequence length polymorphisms ( SSLP ) .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Characterization and genetic mapping of simple sequence repeats in the rice genome .
| | Author: Miyao A Zhong HS Monna L Yano M Yamamoto K Havukkala I Minobe Y Sasaki T | | Journal: DNA Res .
Citation: V : 3 ( 4 ) P : 233-8 Year: 1996 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub8946163 Accession (PMID): 8946163 | Matching Sentences:
[ Sen. 7, subscore: 1.00 ]: Twenty-two loci can be mapped on our RFLP linkage map by these SSRs .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Chalcone synthase in rice ( Oryza sativa L ) : detection of the CHS protein in seedlings and molecular mapping of the chs locus .
| | Author: Reddy AR Scheffler B Madhuri G Srivastava MN Kumar A Sathyanarayanan PV Nair S Mohan M | | Journal: Plant Mol . Biol . Citation: V : 32 ( 4 ) P : 735-43 Year: 1996 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub8980525 Accession (PMID): 8980525 | Matching Sentences:
[ Sen. 6, subscore: 1.00 ]: It was mapped between RFLP markers RG2 and RG103 .
[ Sen. 7, subscore: 1.00 ]: RG2 is the nearest RFLP marker located at a genetic distance of 3 . 3 cM .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Cloning and mapping of variety-specific rice genomic DNA sequences : amplified fragment length polymorphisms ( AFLP ) from silver-stained polyacrylamide gels .
| | Author: Cho YG Blair MW Panaud O McCouch SR .
| | Journal: Genome Citation: V : 39 ( 2 ) P : 373-8 Year: 1996 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub8984005 Accession (PMID): 8984005 | Matching Sentences:
[ Sen. 7, subscore: 1.00 ]: We studied the ability of two cloned AFLP bands to serve as heritable genetic markers by mapping them as RFLPs in an interspecific rice population and found that they represented single-copy DNA at unique loci in the rice genome .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: The physical relationship of barley chromosome 5 ( 1H ) to the linkage groups of rice chromosomes 5 and 10 .
| | Author: Korzun L Knzel G | | Journal: Mol . Gen . Genet . Citation: V : 253 ( 1-2 ) P : 225-31 Year: 1996 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9003307 Accession (PMID): 9003307 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Using a recently developed polymerase chain reaction ( PCR ) -mediated approach for physical mapping of single-copy DNA sequences on microisolated chromosomes of barley , sequence-tagged sites of DNA probes that reveal restriction fragment length polymorphisms ( RFLP ) localized on the linkage maps of rice chromosomes 5 and 10 were allocated to cytologically defined regions of barley chromosome 5 ( 1H ) .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Construction of YAC contigs on rice chromosome 5 .
| | Author: Saji S Umehara Y Kurata N Ashikawa I Sasaki T | | Journal: DNA Res .
Citation: V : 3 ( 5 ) P : 297-302 Year: 1996 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9039499 Accession (PMID): 9039499 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: YAC clones have been identified by colony and Southern hybridization for 105 restriction fragment length polymorphism ( RFLP ) markers and by polymerase chain reaction ( PCR ) screening for 8 sequence-tagged site ( STS ) markers and 5 randomly amplified polymorphic DNA ( RAPD ) markers .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: MADS box genes expressed in developing inflorescences of rice and sorghum .
| | Author: Greco R Stagi L Colombo L Angenent GC Sari-Gorla M P ME .
| | Journal: Mol . Gen . Genet . Citation: V : 253 ( 5 ) P : 615-23 Year: 1997 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9065695 Accession (PMID): 9065695 | Matching Sentences:
[ Sen. 6, subscore: 1.00 ]: The four genes have been mapped on a rice RFLP genetic map : the results are discussed in terms of synteny among cereals .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 3.00 |
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| Title: Molecular mapping and tagging of genes in crop plants .
| | Author: Sharma RP Mohapatra T | | Journal: Genetica Citation: V : 97 ( 3 ) P : 313-20 Year: 1996 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9081859 Accession (PMID): 9081859 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: In India , molecular mapping and tagging of agronomically important genes using RFLP and RAPD markers have been carried out in three different crops : rice , mustard and chickpea .
[ Sen. 5, subscore: 1.00 ]: In mustard , a partial RFLP linkage map has been constructed and one of the yellow seed-coat colour loci has been mapped .
[ Sen. 6, subscore: 1.00 ]: Significant associations of RFLP markers with quantitative traits have also been established .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Physical mapping of rice chromosomes 8 and 9 with YAC clones .
| | Author: Antonio BA Emoto M Wu J Ashikawa I Umehara Y Kurata N Sasaki T | | Journal: DNA Res .
Citation: V : 3 ( 6 ) P : 393-400 Year: 1996 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9097041 Accession (PMID): 9097041 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: A total of 79 and 74 markers from chromosomes 8 and 9 , respectively , were analyzed by YAC colony and Southern hybridization using RFLP markers of cDNA and genomic clones , and by polymerase chain reaction ( PCR ) screening using PCR-derived and sequence-tagged site ( STS ) markers .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Assignment of YAC clones spanning rice chromosomes 10 and 12 .
| | Author: Shimokawa T Kurata N Wu J Umehara Y Ashikawa I Sasaki T | | Journal: DNA Res .
Citation: V : 3 ( 6 ) P : 401-6 Year: 1996 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9097042 Accession (PMID): 9097042 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: Screening of the YAC genomic library was conducted by colony hybridization and Southern hybridization using restriction fragment length polymorphism ( RFLP ) markers or by polymerase chain reaction ( PCR ) using sequence-tagged site ( STS ) markers .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 3.00 |
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| Title: Comparative evaluation of within-cultivar variation of rice ( Oryza sativa L ) using microsatellite and RFLP markers .
| | Author: Olufowote JO Xu Y Chen X Park WD Beachell HM Dilday RH Goto M McCouch SR .
| | Journal: Genome Citation: V : 40 ( 3 ) P : 370-8 Year: 1997 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9202415 Accession (PMID): 9202415 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: Seventy-one rice cultivars were evaluated for within-cultivar variation using a combination of phenotypic , RFLP , and microsatellite or simple sequence length polymorphism ( SSLP ) .
[ Sen. 4, subscore: 1.00 ]: Landrace cultivars were more heterogeneous and displayed a larger number of both RFLP and SSLP alleles than did modern cultivars .
[ Sen. 5, subscore: 1.00 ]: Microsatellite markers detected a greater number of alleles and were able to discriminate between even closely related individuals more efficiently than RFLPs .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Ordered YAC clone contigs assigned to rice chromosomes 3 and 11 .
| | Author: Tanoue H Shimokawa T Wu J Sue N Umehara Y Ashikawa I Kurata N Sasaki T | | Journal: DNA Res .
Citation: V : 4 ( 2 ) P : 133-40 Year: 1997 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9205840 Accession (PMID): 9205840 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Yeast artificial chromosome ( YAC ) clones were arranged on the positions of restriction fragment length polymorphism ( RFLP ) and sequence-tagged site ( STS ) markers already mapped on the high-resolution genetic maps of rice chromosomes 3 and 11 .
[ Sen. 4, subscore: 1.00 ]: Although many DNA fragments of multiple copy marker sequences could not be mapped to their original locations on the genetic map by Southern hybridization because of a lack of RFLP , the physical mapping of YAC clones could often assign specific locations of such multiple copy sequences on the genome .
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Score: 1.00 |
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| Title: Expression of arginine decarboxylase in seedlings of indica rice ( Oryza sativa L ) cultivars as affected by salinity stress .
| | Author: Chattopadhyay MK Gupta S Sengupta DN Ghosh B | | Journal: Plant Mol . Biol . Citation: V : 34 ( 3 ) P : 477-83 Year: 1997 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9225858 Accession (PMID): 9225858 | Matching Sentences:
[ Sen. 6, subscore: 1.00 ]: Southern analysis of EcoRI or BamHI-cut genomic DNAs from different cultivars of rice with OAD1 as the probe revealed strong hybridization with one DNA fragment of rice and restriction fragment length polymorphism ( RFLP ) was noticed .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Mapping QTLs for submergence tolerance in rice by AFLP analysis and selective genotyping .
| | Author: Nandi S Subudhi PK Senadhira D Manigbas NL Sen-Mandi S Huang N | | Journal: Mol . Gen . Genet . Citation: V : 255 ( 1 ) P : 1-8 Year: 1997 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9230893 Accession (PMID): 9230893 | Matching Sentences:
[ Sen. 7, subscore: 1.00 ]: Furthermore , tests with two restriction fragment length polymorphism ( RFLP ) markers and two sequence-tagged site ( STS ) markers showed that they mapped in the expected positions .
[ Sen. 10, subscore: 1.00 ]: We conclude that the combination of AFLP mapping and selective genotyping provides a much faster and easier approach to QTL identification than the use of RFLP markers .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Cytological identification of an isotetrasomic in rice and its application to centromere mapping .
| | Author: Cheng ZK Yu HX Yan CJ Zhu LH Gu MH .
| | Journal: Cell Res .
Citation: V : 7 ( 1 ) P : 31-8 Year: 1997 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9261560 Accession (PMID): 9261560 | Matching Sentences:
[ Sen. 8, subscore: 1.00 ]: So the centromere of chromosome 10 was located somewhere between G1125 and G1084 according to the RFLP linkage map given by Kurata et al [ 1 ] .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Sequencing , expression pattern and RFLP mapping of a senescence-enhanced cDNA from Zea mays with high homology to oryzain gamma and aleurain .
| | Author: Griffiths CM Hosken SE Oliver D Chojecki J Thomas H | | Journal: Plant Mol . Biol . Citation: V : 34 ( 5 ) P : 815-21 Year: 1997 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9278172 Accession (PMID): 9278172 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: Southern and RFLP analysis provide evidence that the gene has two copies , on chromosomes 2 and 7 .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: A large-insert ( 130 kbp ) bacterial artificial chromosome library of the rice blast fungus Magnaporthe grisea : genome analysis , contig assembly , and gene cloning .
| | Author: Zhu H Choi S Johnston AK Wing RA Dean RA .
| | Journal: Fungal Genet . Biol . Citation: V : 21 ( 3 ) P : 337-47 Year: 1997 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9290247 Accession (PMID): 9290247 | Matching Sentences:
[ Sen. 10, subscore: 1.00 ]: In addition , a 550-kbp contig composed of 6 BAC clones was constructed that encompassed two adjacent RFLP markers on chromosome 2 .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 3.00 |
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| Title: Alien introgression in rice .
| | Author: Brar DS Khush GS .
| | Journal: Plant Mol . Biol . Citation: V : 35 ( 1-2 ) P : 35-47 Year: 1997 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9291958 Accession (PMID): 9291958 | Matching Sentences:
[ Sen. 12, subscore: 1.00 ]: RFLP analysis revealed introgression from 11 of the 12 chromosomes of C genome species into rice .
[ Sen. 13, subscore: 1.00 ]: Introgression has also been obtained from other distant genomes ( EE , FF , GG ) into rice and in majority of the cases one or two RFLP markers were introgressed .
[ Sen. 14, subscore: 1.00 ]: Reciprocal replacement of RFLP alleles of wild species with the alleles of O sativa indicates alien gene transfer through crossing over .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Linkage map of phenotype and RFLP markers in rice .
| | Author: Yoshimura A Ideta O Iwata N | | Journal: Plant Mol . Biol . Citation: V : 35 ( 1-2 ) P : 49-60 Year: 1997 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9291959 Accession (PMID): 9291959 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: The present paper concisely reveals present situation on linkage map of phenotype markers , the integration linkage map of phenotype and RFLP markers and the genetic stocks available .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Rice molecular genetic map using RFLPs and its applications .
| | Author: Nagamura Y Antonio BA Sasaki T | | Journal: Plant Mol . Biol . Citation: V : 35 ( 1-2 ) P : 79-87 Year: 1997 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9291962 Accession (PMID): 9291962 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: A total of over 3000 DNA markers , mainly with RFLPs , have been mapped on the rice genome .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Microsatellite marker development , mapping and applications in rice genetics and breeding .
| | Author: McCouch SR Chen X Panaud O Temnykh S Xu Y Cho YG Huang N Ishii T Blair M | | Journal: Plant Mol . Biol . Citation: V : 35 ( 1-2 ) P : 89-99 Year: 1997 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9291963 Accession (PMID): 9291963 | Matching Sentences:
[ Sen. 8, subscore: 1.00 ]: The availability of increasing numbers of mapped SSLP markers can be expected to complement existing RFLP and AFLP maps , increasing the power and resolution of genome analysis in rice .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Physical mapping of the rice genome with YAC clones .
| | Author: Kurata N Umehara Y Tanoue H Sasaki T | | Journal: Plant Mol . Biol . Citation: V : 35 ( 1-2 ) P : 101-13 Year: 1997 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9291964 Accession (PMID): 9291964 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: A total of 1285 RFLP and RAPD markers almost evenly distributed on the rice genetic map could select 2974 YAC clones and 2443 clones of them were located on their original positions .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Physical mapping of the rice genome with BACs .
| | Author: Zhang HB Wing RA .
| | Journal: Plant Mol . Biol . Citation: V : 35 ( 1-2 ) P : 115-27 Year: 1997 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9291965 Accession (PMID): 9291965 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: The development of genetics in this century has been catapulted forward by several milestones : rediscovery of Mendels laws , determination of DNA as the genetic material , discovery of the double-helix structure of DNA and its implications for genetic behavior , and most recently , analysis of restriction fragment length polymorphisms ( RFLPs ) .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Large-scale EST sequencing in rice .
| | Author: Yamamoto K Sasaki T | | Journal: Plant Mol . Biol . Citation: V : 35 ( 1-2 ) P : 135-44 Year: 1997 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9291967 Accession (PMID): 9291967 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: Isolated and partially characterized cDNA clones have contributed not only to the construction of an RFLP linkage map and physical maps of the chromosomes but also to investigations of the mechanisms of expression of various isozymes and family genes .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: QTL analysis to study the association between leaf size and abscisic acid accumulation in droughted rice leaves and comparisons across cereals .
| | Author: Quarrie SA Laurie DA Zhu J Lebreton C Semikhodskii A Steed A Witsenboer H Calestani C | | Journal: Plant Mol . Biol . Citation: V : 35 ( 1-2 ) P : 155-65 Year: 1997 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9291969 Accession (PMID): 9291969 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: Here we present a detailed genetic analysis of ABA accumulation in detached and partially dehydrated rice leaves . using a population of F2 plants generated from the lowland x upland cross IR20 ( high-ABA ) x 63-83 ( low-ABA ) which was mapped with RFLP and AFLP markers .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Detailed comparative mapping of cereal chromosome regions corresponding to the Ph1 locus in wheat .
| | Author: Foote T Roberts M Kurata N Sasaki T Moore G | | Journal: Genetics Citation: V : 147 ( 2 ) P : 801-7 Year: 1997 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9335614 Accession (PMID): 9335614 | Matching Sentences:
[ Sen. 3, subscore: 1.00 ]: Markers located in one region of rice chromosome 9 encompassed by the YAC contigs have exhibited restriction fragment length polymorphism ( RFLP ) using deletion lines for the Ph1 locus .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Genetic variation of rice tungro bacilliform virus in the Philippines .
| | Author: Villegas LC Druka A Bajet NB Hull R | | Journal: Virus Genes Citation: V : 15 ( 3 ) P : 195-201 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9482585 Accession (PMID): 9482585 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Restriction fragment length polymorphisms ( RFLPs ) were found in 27 full genome length clones from a glasshouse isolate of rice tungro bacilliform pararetrovirus ( RTBV ) from the International Rice Research Institute ( IRRI ) , the Philippines and from clones from 5 field isolates from different parts of the Philippines .
[ Sen. 3, subscore: 1.00 ]: The RFLPs were due to single base changes and represented about 10% of the potential sites .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 9.00 |
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| Title: Down-regulation of RFL , the FLO/LFY homolog of rice , accompanied with panicle branch initiation .
| | Author: Kyozuka J Konishi S Nemoto K Izawa T Shimamoto K | | Journal: Proc . Natl . Acad . Sci . USA Citation: V : 95 ( 5 ) P : 1979-82 Year: 1998 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9482818 Accession (PMID): 9482818 | Matching Sentences:
[ Sen. 7, subscore: 2.00 ]: Expression pattern of RFL raised a possibility that , unlike FLO and LFY , RFL might be involved in panicle branching .
[ Sen. 2, subscore: 1.00 ]: To examine whether same mechanisms control floral development in distantly related species such as grasses , we isolated RFL , FLO-LFY homolog of rice , and examined its expression and function .
[ Sen. 3, subscore: 1.00 ]: Northern analysis showed that RFL is expressed predominantly in very young panicle but not in mature florets , mature leaves , or roots .
[ Sen. 4, subscore: 1.00 ]: In situ hybridization revealed that RFL RNA was expressed in epidermal cells in young leaves at vegetative growth stage .
[ Sen. 5, subscore: 1.00 ]: After the transition to reproductive stage , RFL RNA was detected in all layers of very young panicle including the apical meristem , but absent in the incipient primary branches .
[ Sen. 6, subscore: 1.00 ]: As development of branches proceeds , RFL RNA accumulation localized in the developing branches except for the apical meristems of the branches and secondary branch primordia .
[ Sen. 8, subscore: 1.00 ]: Transgenic Arabidopsis plants constitutively expressing RFL from the cauliflower mosaic virus 35S promoter were produced to test whether 35S-RFL would cause similar phenotype as observed in 35S-LFY plants .
[ Sen. 10, subscore: 1.00 ]: Instead , development of cotyledons , rosette leaves , petals , and stamens was severely affected , demonstrating that RFL function is distinct from that of LFY .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: A 120 kilobase resolution contig map of the rice genome .
| | Author: Hong G Qian Y Yu S Hu X Zhu J Tao W Li W Su C Zhao H Qiu L Yu D Liu X Wu B Zhang X Zhao W | | Journal: DNA Seq .
Citation: V : 7 ( 6 ) P : 319-35 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9524812 Accession (PMID): 9524812 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: To form the contig map , 565 molecular markers of RFLP , STS , cDNA and anchor set derived from two O Sativa varieties were by colony hybridization mapped to the contigs , which were then assigned to and ordered along the particular chromosomes according to the marker colinearity .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 4.00 |
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| Title: Physical mapping of the liguleless linkage group in Sorghum bicolor using rice RFLP-selected sorghum BACs .
| | Author: Zwick MS Islam-Faridi MN Czeschin DG Wing RA Hart GE Stelly DM Price HJ .
| | Journal: Genetics Citation: V : 148 ( 4 ) P : 1983-92 Year: 1998 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9560411 Accession (PMID): 9560411 | Matching Sentences:
[ Sen. 6, subscore: 2.00 ]: Selected BACs , representing RFLP loci , were end-cloned for RFLP mapping , and the relative linkage order of these clones was in full agreement with the physical data .
[ Sen. 2, subscore: 1.00 ]: Six liguleless-associated rice restriction fragment length polymorphism ( RFLP ) markers were used to select 16 homeologous sorghum BACs , which were in turn used to physically map the liguleless linkage group in sorghum .
[ Sen. 7, subscore: 1.00 ]: Similarities in locus order and the association of RFLP-selected BAC markers with two different chromosomes were found to exist between the linkage map of the liguleless region in maize and the physical map of the liguleless region in sorghum .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Mapping of rice Rf gene by bulked line analysis .
| | Author: Tan XL Vanavichit A Amornsilpa S Trangoonrung S | | Journal: DNA Res .
Citation: V : 5 ( 1 ) P : 15-8 Year: 1998 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9628578 Accession (PMID): 9628578 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: A method , bulked line analysis ( BLA ) , was developed for identification of the RFLP markers associated with a target gene .
[ Sen. 7, subscore: 1.00 ]: A fertility-restoring gene was successfully identified by linkage with RFLP markers .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Sequencing and chromosomal localization of the RA138 gene encoding a rice allergenic protein .
| | Author: Oh SJ Lee MC Cho YG Kim JK Nahm BH .
| | Journal: Mol .
Cells Citation: V : 8 ( 2 ) P : 175-80 Year: 1998 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9638649 Accession (PMID): 9638649 | Matching Sentences:
[ Sen. 8, subscore: 1.00 ]: The locus that may contain multiple copies of the RA138 was located between RFLP markers RG477A and C492 with genetic distances of 10 . 7 cM and 6 . 7 cM , respectively .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Isolation and mapping of a family of putative zinc-finger protein cDNAs from rice .
| | Author: Song J Yamamoto K Shomura A Itadani H Zhong HS Yano M Sasaki T | | Journal: DNA Res .
Citation: V : 5 ( 2 ) P : 95-101 Year: 1998 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9679197 Accession (PMID): 9679197 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: Using restriction fragment length polymorphism ( RFLP ) linkage analysis , we determined the chromosomal location of the seven cDNA clones .
[ Sen. 6, subscore: 1.00 ]: The position of R2931 on the RFLP linkage map was closely linked to Hd-3 , one of the putative quantitative trait loci ( QTL ) controlling heading date in rice .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Identification of trait-improving quantitative trait loci alleles from a wild rice relative , Oryza rufipogon .
| | Author: Xiao J Li J Grandillo S Ahn SN Yuan L Tanksley SD McCouch SR .
| | Journal: Genetics Citation: V : 150 ( 2 ) P : 899-909 Year: 1998 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9755218 Accession (PMID): 9755218 | Matching Sentences:
[ Sen. 6, subscore: 1.00 ]: A set of 122 RFLP and microsatellite markers was used to identify QTL .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Construction of a BAC library of the rice blast fungus Magnaporthe grisea and finding specific genome regions in which its transposons tend to cluster .
| | Author: Nishimura M Nakamura S Hayashi N Asakawa S Shimizu N Kaku H Hasebe A Kawasaki S | | Journal: Biosci . Biotechnol . Biochem . Citation: V : 62 ( 8 ) P : 1515-21 Year: 1998 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9757557 Accession (PMID): 9757557 | Matching Sentences:
[ Sen. 7, subscore: 1.00 ]: Test hybridization with a single-copy RFLP marker showed ten positive clones , of which restriction patterns indicated no chimerality or deletions .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: [ Genetic analysis on a new sterile locus discovered in hybrids between indica and japonica rice ( Oryza sativa L ) ] | | Author: Zhu XD Wang JL Qian Q Zhang XH Zeng DL Zhu LH Min SK Xiong ZM .
| | Journal: Yi Chuan Xue Bao Citation: V : 25 ( 3 ) P : 245-51 Year: Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9800438 Accession (PMID): 9800438 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: The new sterility locus was preliminarily located near G24 marker on chromosome 11 detected by RFLP .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Physical mapping of duplicated genomic regions of two chromosome ends in rice .
| | Author: Wu J Kurata N Tanoue H Shimokawa T Umehara Y Yano M Sasaki T | | Journal: Genetics Citation: V : 150 ( 4 ) P : 1595-603 Year: 1998 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9832535 Accession (PMID): 9832535 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: However , differences of RFLP frequency for the duplicated DNA copies and recombination frequency for a given homoeologous area between the two regions were observed , indicating that these changes in genome organization occurred after the duplication .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Physical mapping of unique nucleotide sequences on identified rice chromosomes .
| | Author: Ohmido N Akiyama Y Fukui K | | Journal: Plant Mol . Biol . Citation: V : 38 ( 6 ) P : 1043-52 Year: 1998 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9869410 Accession (PMID): 9869410 | Matching Sentences:
[ Sen. 5, subscore: 1.00 ]: Furthermore a single RFLP marker , 1 . 29 kb in size , was mapped successfully to the distal region of the long arm of rice chromosome 4 ( 4q2 . 1 ) .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Differentiation of rice tungro bacilliform virus strains by restriction analysis and DNA hybridization .
| | Author: Cabauatan PQ Arboleda M Azzam O | | Journal: J Virol .
Methods Citation: V : 76 ( 1-2 ) P : 121-6 Year: 1998 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9923746 Accession (PMID): 9923746 | Matching Sentences:
[ Sen. 2, subscore: 1.00 ]: Four RTBV strains maintained in the greenhouse for 4 years , G1 , G2 , Ic , and L , were differentiated by restriction fragment length polymorphism ( RFLP ) analysis of the native viral DNA .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Construction of a DNA library from chromosome 4 of rice ( Oryza sativa ) by microdissection .
| | Author: Mao YW Liang SY Song WQ Li XL Chen RY .
| | Journal: Cell Res .
Citation: V : 8 ( 4 ) P : 285-93 Year: 1998 Type: ARTICLE | | Literature: oryza Field: abstract Doc ID: pub9934536 Accession (PMID): 9934536 | Matching Sentences:
[ Sen. 4, subscore: 1.00 ]: Southern blot analysis with rice genomic DNA and specific RFLP markers demonstrated that the PCR products were derived from rice chromosome 4 .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Isolation and characterization of rice MADS box gene homologues and their RFLP mapping .
| | Author: Shinozuka Y Kojima S Shomura A Ichimura H Yano M Yamamoto K Sasaki T | | Journal: DNA Res .
Citation: V : 6 ( 2 ) P : 123-9 Year: 1999 Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub10382970 Accession (PMID): 10382970 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Isolation and characterization of rice MADS box gene homologues and their RFLP mapping .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Phylogenetic relationships in the genus Oryza based on mitochondrial RFLPs .
| | Author: Abe T Edanami T Adachi E Sasahara T | | Journal: Genes Genet .
Syst Citation: V : 74 ( 1 ) P : 23-7 Year: 1999 Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub10549129 Accession (PMID): 10549129 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Phylogenetic relationships in the genus Oryza based on mitochondrial RFLPs .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Mapping of avirulence genes in the rice blast fungus , Magnaporthe grisea , with RFLP and RAPD markers .
| | Author: Dioh W Tharreau D Notteghem JL Orbach M Lebrun MH .
| | Journal: Mol .
Plant Microbe Interact .
Citation: V : 13 ( 2 ) P : 217-27 Year: 2000 Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub10659712 Accession (PMID): 10659712 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Mapping of avirulence genes in the rice blast fungus , Magnaporthe grisea , with RFLP and RAPD markers .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Linkage group alignment of sorghum RFLP maps using a RIL mapping population .
| | Author: Subudhi PK Nguyen HT .
| | Journal: Genome Citation: V : 43 ( 2 ) P : 240-9 Year: 2000 Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub10791811 Accession (PMID): 10791811 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Linkage group alignment of sorghum RFLP maps using a RIL mapping population .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: [ A study of the genetic diversity of common wild rice ( O rufipogon Griff . ) and cultivated rice ( O sativa L ) by RFLP analysis ] | | Author: Sun CQ Wang XK Yoshimura A Iwata N | | Journal: Yi Chuan Xue Bao Citation: V : 27 ( 3 ) P : 227-34 Year: Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub10887694 Accession (PMID): 10887694 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: [ A study of the genetic diversity of common wild rice ( O rufipogon Griff . ) and cultivated rice ( O sativa L ) by RFLP analysis ]
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: [ RFLP analysis on wide compatibility genes in rice variety dular of ecotype aus ] | | Author: Yan CJ Liang GH Zhu LH Gu MH .
| | Journal: Yi Chuan Xue Bao Citation: V : 27 ( 5 ) P : 409-17 Year: Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub10979186 Accession (PMID): 10979186 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: [ RFLP analysis on wide compatibility genes in rice variety dular of ecotype aus ]
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Characterization of euploid backcross progenies derived from interspecific hybrids between Oryza sativa and O eichingeri by restriction fragment length polymorphism ( RFLP ) analysis and genomic in situ hybridization ( GISH ) .
| | Author: Yan H Liu G Cheng Z Min S Zhu L | | Journal: Genome Citation: V : 44 ( 1 ) P : 86-95 Year: 2001 Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub11269361 Accession (PMID): 11269361 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Characterization of euploid backcross progenies derived from interspecific hybrids between Oryza sativa and O eichingeri by restriction fragment length polymorphism ( RFLP ) analysis and genomic in situ hybridization ( GISH ) .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: [ RFLP analysis of the effect of wide compatibility genes in Aus variety Dular ] | | Author: Yi CD Yan CJ Liang GH Zhu LH Gu MH .
| | Journal: Yi Chuan Xue Bao Citation: V : 28 ( 6 ) P : 540-9 Year: Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub11431987 Accession (PMID): 11431987 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: [ RFLP analysis of the effect of wide compatibility genes in Aus variety Dular ]
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: RAPD , RFLP and SSLP analyses of phylogenetic relationships between cultivated and wild species of rice .
| | Author: Bautista NS Solis R Kamijima O Ishii T | | Journal: Genes Genet .
Syst Citation: V : 76 ( 2 ) P : 71-9 Year: 2001 Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub11434461 Accession (PMID): 11434461 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: RAPD , RFLP and SSLP analyses of phylogenetic relationships between cultivated and wild species of rice .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: [ The comparison of genetic divergences and its relationships to heterosis revealed by SSR and RFLP markers in rice ( Oryza sativa L ) ] | | Author: Zhu ZF Sun CQ Jiang TB Fu Q Wang XK .
| | Journal: Yi Chuan Xue Bao Citation: V : 28 ( 8 ) P : 738-45 Year: 2001 Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub11554348 Accession (PMID): 11554348 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: [ The comparison of genetic divergences and its relationships to heterosis revealed by SSR and RFLP markers in rice ( Oryza sativa L ) ]
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Rapid and reliable identification of rice genomes by RFLP analysis of PCR-amplified Adh genes .
| | Author: Ge S Sang T Lu BR Hong DY .
| | Journal: Genome Citation: V : 44 ( 6 ) P : 1136-42 Year: 2001 Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub11768218 Accession (PMID): 11768218 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Rapid and reliable identification of rice genomes by RFLP analysis of PCR-amplified Adh genes .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: A high-density genetic map of Sorghum bicolor ( L ) Moench based on 2926 AFLP , RFLP and SSR markers .
| | Author: Menz MA Klein RR Mullet JE Obert JA Unruh NC Klein PE .
| | Journal: Plant Mol . Biol . Citation: V : 48 ( 5-6 ) P : 483-99 Year: Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub11999830 Accession (PMID): 11999830 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: A high-density genetic map of Sorghum bicolor ( L ) Moench based on 2926 AFLP , RFLP and SSR markers .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: RFLP mapping of a Hordeum bulbosum gene highly expressed in pistils and its relationship to homoeologous loci in other Gramineae species .
| | Author: Gudu S Laurie A Kasha J Xia J Snape W | | Journal: Citation: V : 105 ( 2-3 ) P : 271-276 Year: 2002 Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub12582529 Accession (PMID): 12582529 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: RFLP mapping of a Hordeum bulbosum gene highly expressed in pistils and its relationship to homoeologous loci in other Gramineae species .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: RFLP-facilitated investigation of the quantitative resistance of rice to brown planthopper ( Nilaparvata lugens ) .
| | Author: Xu XF Mei HW Luo LJ Cheng XN Li ZK .
| | Journal: Citation: V : 104 ( 2-3 ) P : 248-253 Year: 2002 Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub12582694 Accession (PMID): 12582694 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: RFLP-facilitated investigation of the quantitative resistance of rice to brown planthopper ( Nilaparvata lugens ) .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Genetic differentiation of wild relatives of rice as assessed by RFLP analysis .
| | Author: Lu BR Zheng KL Qian HR Zhuang JY .
| | Journal: Theor . Appl . Genet . Citation: V : 106 ( 1 ) P : 101-6 Year: 2002 Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub12582876 Accession (PMID): 12582876 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Genetic differentiation of wild relatives of rice as assessed by RFLP analysis .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Mechanism underlying regulated expression of RFL , a conserved transcription factor , in the developing rice inflorescence .
| | Author: Prasad K Kushalappa K Vijayraghavan U | | Journal: Mech . Dev . Citation: V : 120 ( 4 ) P : 491-502 Year: 2003 Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub12676326 Accession (PMID): 12676326 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Mechanism underlying regulated expression of RFL , a conserved transcription factor , in the developing rice inflorescence .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Comparison of population genetic structures of common wild rice ( Oryza rufipogon Griff . ) , as revealed by analyses of quantitative traits , allozymes , and RFLPs .
| | Author: Cai HW Wang XK Morishima H | | Journal: Heredity Citation: V : 92 ( 5 ) P : 409-17 Year: 2004 Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub14997180 Accession (PMID): 14997180 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Comparison of population genetic structures of common wild rice ( Oryza rufipogon Griff . ) , as revealed by analyses of quantitative traits , allozymes , and RFLPs .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Chromosomal rearrangements differentiating the ryegrass genome from the Triticeae , oat , and rice genomes using common heterologous RFLP probes .
| | Author: Sim S Chang T Curley J Warnke SE Barker RE Jung G | | Journal: Theor . Appl . Genet . Citation: V : 110 ( 6 ) P : 1011-9 Year: 2005 Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub15742203 Accession (PMID): 15742203 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Chromosomal rearrangements differentiating the ryegrass genome from the Triticeae , oat , and rice genomes using common heterologous RFLP probes .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Production and characterization of a complete set of individual chromosome additions from Oryza officinalis to Oryza sativa using RFLP and GISH analyses .
| | Author: Tan G Jin H Li G He R Zhu L He G | | Journal: Theor . Appl . Genet . Citation: V : 111 ( 8 ) P : 1585-95 Year: 2005 Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub16177899 Accession (PMID): 16177899 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Production and characterization of a complete set of individual chromosome additions from Oryza officinalis to Oryza sativa using RFLP and GISH analyses .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: RFLP analysis for mitochondrial genome of CMS-rice .
| | Author: Huang W Wang L Yi P Tan XL Zhang XM Zhang ZJ Li YS Zhu YG .
| | Journal: Yi Chuan Xue Bao Citation: V : 33 ( 4 ) P : 330-8 Year: 2006 Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub16625831 Accession (PMID): 16625831 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: RFLP analysis for mitochondrial genome of CMS-rice .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Avirulence gene and insertion element-based RFLP as well as RAPD markers reveal high levels of genomic polymorphism in the rice pathogen Xanthomonas oryzae pv . oryzae .
| | Author: Hu J Zhang Y Qian W He C | | Journal: Syst Appl Microbiol Citation: V : 30 P : 587-600 Year: 2007 Type: MEDLINE | | Literature: oryza Field: title Doc ID: pub17959329 Accession (PMID): 17959329 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Avirulence gene and insertion element-based RFLP as well as RAPD markers reveal high levels of genomic polymorphism in the rice pathogen Xanthomonas oryzae pv . oryzae .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Analysis of non-TIR NBS-LRR resistance gene analogs in Musa acuminata Colla : isolation , RFLP marker development , and physical mapping .
| | Author: Miller RN Bertioli DJ Baurens FC Santos CM Alves PC Martins NF Togawa RC Souza MT Jr Pappas GJ Jr | | Journal: BMC Plant Biol Citation: V : 8 P : 15 Year: 2008 Type: MEDLINE | | Literature: oryza Field: title Doc ID: pub18234103 Accession (PMID): 18234103 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Analysis of non-TIR NBS-LRR resistance gene analogs in Musa acuminata Colla : isolation , RFLP marker development , and physical mapping .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Distinct regulatory role for RFL , the rice LFY homolog , in determining flowering time and plant architecture .
| | Author: Rao NN Prasad K Kumar PR Vijayraghavan U | | Journal: Proc Natl Acad Sci U S A Citation: V : 105 P : 3646-51 Year: 2008 Type: MEDLINE | | Literature: oryza Field: title Doc ID: pub18305171 Accession (PMID): 18305171 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Distinct regulatory role for RFL , the rice LFY homolog , in determining flowering time and plant architecture .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Toward the construction of a molecular map of cassava ( Manihot esculenta Crantz ) : comparison of restriction enzymes and probe sources in detecting RFLPs .
| | Author: Angel F Arias DI Tohme J Iglesias C Roca WM .
| | Journal: J Biotechnol .
Citation: V : 31 ( 1 ) P : 103-13 Year: 1993 Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub7765314 Accession (PMID): 7765314 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Toward the construction of a molecular map of cassava ( Manihot esculenta Crantz ) : comparison of restriction enzymes and probe sources in detecting RFLPs .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: RFLP mapping of the maize dzr1 locus , which regulates methionine-rich 10 kDa zein accumulation .
| | Author: Chaudhuri S Messing J | | Journal: Mol . Gen . Genet . Citation: V : 246 ( 6 ) P : 707-15 Year: 1995 Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub7898438 Accession (PMID): 7898438 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: RFLP mapping of the maize dzr1 locus , which regulates methionine-rich 10 kDa zein accumulation .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: [ Molecular study on null allolic RFLPs among rice varieties ] | | Author: Mao L Zhu L | | Journal: Yi Chuan Xue Bao Citation: V : 20 ( 4 ) P : 324-33 Year: Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub7902724 Accession (PMID): 7902724 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: [ Molecular study on null allolic RFLPs among rice varieties ]
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Score: 1.00 |
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| Title: Molecular phylogeny based on RFLP and its relation with alkaloid patterns in Lupinus plants .
| | Author: Yamazaki M Sato A Saito K Murakoshi I | | Journal: Biol . Pharm . Bull . Citation: V : 16 ( 11 ) P : 1182-4 Year: 1993 Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub7906176 Accession (PMID): 7906176 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Molecular phylogeny based on RFLP and its relation with alkaloid patterns in Lupinus plants .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: RFLP mapping of genes conferring complete and partial resistance to blast in a durably resistant rice cultivar .
| | Author: Wang GL Mackill DJ Bonman JM McCouch SR Champoux MC Nelson RJ .
| | Journal: Genetics Citation: V : 136 ( 4 ) P : 1421-34 Year: 1994 Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub7912216 Accession (PMID): 7912216 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: RFLP mapping of genes conferring complete and partial resistance to blast in a durably resistant rice cultivar .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Comparative RFLP mapping of a wild rice , Oryza officinalis , and cultivated rice , O sativa .
| | Author: Jena KK Khush GS Kochert G | | Journal: Genome Citation: V : 37 ( 3 ) P : 382-9 Year: 1994 Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub7913453 Accession (PMID): 7913453 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Comparative RFLP mapping of a wild rice , Oryza officinalis , and cultivated rice , O sativa .
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Score: 1.00 |
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| Title: Comparative RFLP mapping of an allotetraploid wild rice species ( Oryza latifolia ) and cultivated rice ( O sativa ) .
| | Author: Huang H Kochert G | | Journal: Plant Mol . Biol . Citation: V : 25 ( 4 ) P : 633-48 Year: 1994 Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub7914758 Accession (PMID): 7914758 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Comparative RFLP mapping of an allotetraploid wild rice species ( Oryza latifolia ) and cultivated rice ( O sativa ) .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 2.00 |
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| Title: Restriction fragment length polymorphisms ( RFLPs ) of medicinal plants and crude drugs .
I RFLP probes allow clear identification of Duboisia interspecific hybrid genotypes in both fresh and dried it issues .
| | Author: Mizukami H Ohbayashi K Kitamura Y Ikenaga T | | Journal: Biol . Pharm . Bull . Citation: V : 16 ( 4 ) P : 388-90 Year: 1993 Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub8102923 Accession (PMID): 8102923 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Restriction fragment length polymorphisms ( RFLPs ) of medicinal plants and crude drugs .
[ Sen. 2, subscore: 1.00 ]: I RFLP probes allow clear identification of Duboisia interspecific hybrid genotypes in both fresh and dried it issues .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Genomic organization of 57 ribosomal protein genes in rice ( Oryza sativa L ) through RFLP mapping .
| | Author: Wu J Matsui E Yamamoto K Nagamura Y Kurata N Takuji S Minobe Y | | Journal: Genome Citation: V : 38 ( 6 ) P : 1189-200 Year: 1995 Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub8654915 Accession (PMID): 8654915 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Genomic organization of 57 ribosomal protein genes in rice ( Oryza sativa L ) through RFLP mapping .
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Score: 1.00 |
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| Title: Comparative evaluation of within-cultivar variation of rice ( Oryza sativa L ) using microsatellite and RFLP markers .
| | Author: Olufowote JO Xu Y Chen X Park WD Beachell HM Dilday RH Goto M McCouch SR .
| | Journal: Genome Citation: V : 40 ( 3 ) P : 370-8 Year: 1997 Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub9202415 Accession (PMID): 9202415 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Comparative evaluation of within-cultivar variation of rice ( Oryza sativa L ) using microsatellite and RFLP markers .
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Score: 1.00 |
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| Title: Sequencing , expression pattern and RFLP mapping of a senescence-enhanced cDNA from Zea mays with high homology to oryzain gamma and aleurain .
| | Author: Griffiths CM Hosken SE Oliver D Chojecki J Thomas H | | Journal: Plant Mol . Biol . Citation: V : 34 ( 5 ) P : 815-21 Year: 1997 Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub9278172 Accession (PMID): 9278172 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Sequencing , expression pattern and RFLP mapping of a senescence-enhanced cDNA from Zea mays with high homology to oryzain gamma and aleurain .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Linkage map of phenotype and RFLP markers in rice .
| | Author: Yoshimura A Ideta O Iwata N | | Journal: Plant Mol . Biol . Citation: V : 35 ( 1-2 ) P : 49-60 Year: 1997 Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub9291959 Accession (PMID): 9291959 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Linkage map of phenotype and RFLP markers in rice .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Rice molecular genetic map using RFLPs and its applications .
| | Author: Nagamura Y Antonio BA Sasaki T | | Journal: Plant Mol . Biol . Citation: V : 35 ( 1-2 ) P : 79-87 Year: 1997 Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub9291962 Accession (PMID): 9291962 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Rice molecular genetic map using RFLPs and its applications .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Down-regulation of RFL , the FLO/LFY homolog of rice , accompanied with panicle branch initiation .
| | Author: Kyozuka J Konishi S Nemoto K Izawa T Shimamoto K | | Journal: Proc . Natl . Acad . Sci . USA Citation: V : 95 ( 5 ) P : 1979-82 Year: 1998 Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub9482818 Accession (PMID): 9482818 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Down-regulation of RFL , the FLO/LFY homolog of rice , accompanied with panicle branch initiation .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
Score: 1.00 |
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| Title: Physical mapping of the liguleless linkage group in Sorghum bicolor using rice RFLP-selected sorghum BACs .
| | Author: Zwick MS Islam-Faridi MN Czeschin DG Wing RA Hart GE Stelly DM Price HJ .
| | Journal: Genetics Citation: V : 148 ( 4 ) P : 1983-92 Year: 1998 Type: ARTICLE | | Literature: oryza Field: title Doc ID: pub9560411 Accession (PMID): 9560411 | Matching Sentences:
[ Sen. 1, subscore: 1.00 ]: Physical mapping of the liguleless linkage group in Sorghum bicolor using rice RFLP-selected sorghum BACs .
| | Supplemental links/files: reference in endnote online text related articles pubmed citation | |
